Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0070 ATGATGAAGAACGTTAAGATATCATTGTGCATGCTTCTCATAGCATTGGTGCGCCTAGGGGCAAGTGTACCCCCAAGCTTCAACTATGGTGATGCACTTGACAAAACTTTATTGTTCTTTGAAGCACAAAGGTCAGGTAAATTACCATTGCAGCAGCAGCGTGTTAAGTGGCGTGGTGATTCTGGTCTCAATGATGGATTTCAGCAAGGAGTAGACCTGGTGGGTGGGTATTATGATGCAGGAGATCATGTCAAGTTTGGGCTGCCAATGGCATACAGCATCACAATGCTTGCATGGGGAGCAATTCAATTCAGGAAAGAAATCAGTGACTTAAACCAATTGGGAAACACATTATCGGCAATTAAATGGGGAACTGACTACCTCATCAAAGCACATCCTCAGCCTAATGTTCTTTATGGACAGGTGGGTGATGGGGCTTCTGATCACTACTGCTGGGAGCGTGCTGAAGACATGTCGACTTCAAGAACTGCCTACAGAATTGATGAAGAGCACCCTGGTTCAGATGTTGCTGGTGAAACCGCAGCTGCGTTGGCTTCAGCATCCATTGCTTTCAGTCCCTACAACTCTTCTTACTCTGCTCTTTTACTAGTTCATGCAAAGCAGCTCTTCACATTTGCAGATAGGTTCAGAGGTATATACGATAACTCCATATATAGTGCTCATCAATTCTATGCTTCTTCCGGTTACTCAGATGAATTGTTATGGGCTGCTGCCTGGTTGTATGAAGCAACTGGTGATGAGTACTACCTAAAGTATGTAGTTGACAATGCTGTCTATTTGGGTGGAACTGGCTGGGCAGTCAAAGAGTTCAATTGGGACAACAAATATGCTGGTCTGCAGATCCTCTTGTCAAAAGTACTACTAGAAGGAAAGGCTGGTTCTTATGCCTCAACACTAAAGCAATACCAGGCCAAGGCAGATTATTTTGCATGTGCTTGCTTGCAGAAGAATGATGGTTACAATGTCCAGAAAACTCCAGGTGGCTTACTATACGTACACGATTGGAACAACCTGCAGTATGTTTCTTCTGCTGCATTCCTTTTAGTTGTTTACTCTAATTATCTATCAGCGGCAAAAACCCAACTCAACTGTCCAGAGGGACAAATTCAGCCTCAGGATCTCATTAGTTTTTCGCAGTCACAGGTTGACTATATCCTTGGTGAAAACCCAAAGTATATTAGTTACTTGGTTGGATTTGGACAAAATTATCCTCTTCATGTTCACCACAGAGGAGCTTCCATTGCTTCCATCTTTTCTCTCCAATCTGAGGTTGGCTGCACCCAAGGATTTGATGCATGGTATAACAGTGCTGAGGCAAATCCCAATGTCATCTACGGTGGCCTTGTGGGGGGTCCAGATGGGAATGATGCCTTCTCTGATGAGAGATCCAACTATGAACAAACTGAACCTACACTTGCAGGCAATGCTCCTCTAGTAGCCATCTTTGCTAAACTGCAGAGTTTATATGGTAATATAGGTTCCTACCACCGAAATGAAGTACCAGTGCCCCAACAGAAAACACCAAATACAGGAACATGGAAAACACAGGCTCCTAAAACATCAGAAGTTGCAGGTGTACCAGTTGAGTTTCTTCACTCAATTACTACTTCATGGAGTGTTGGAGATGCAACTTATTACCGTCACAGGGTGATAATCAAGAACACTTCTTTGAAGCCAATCTCAAATCTTAATTTGGTGATTGAGAATCTGTCAGGTTCTCTATGGGGTCTTTCACCAACAAAAGAAAAGAACACCTATGAGCTTCCCCAATGGCTCAAGGTCTTGAATCCTGCCTCAGAGTATATGTTCGTTTATGTTCAAGGAGGAGACCAAGCAAAAATATCCATTCAAAGTTTCCACTAA 1884 0.4321 MMKNVKISLCMLLIALVRLGASVPPSFNYGDALDKTLLFFEAQRSGKLPLQQQRVKWRGDSGLNDGFQQGVDLVGGYYDAGDHVKFGLPMAYSITMLAWGAIQFRKEISDLNQLGNTLSAIKWGTDYLIKAHPQPNVLYGQVGDGASDHYCWERAEDMSTSRTAYRIDEEHPGSDVAGETAAALASASIAFSPYNSSYSALLLVHAKQLFTFADRFRGIYDNSIYSAHQFYASSGYSDELLWAAAWLYEATGDEYYLKYVVDNAVYLGGTGWAVKEFNWDNKYAGLQILLSKVLLEGKAGSYASTLKQYQAKADYFACACLQKNDGYNVQKTPGGLLYVHDWNNLQYVSSAAFLLVVYSNYLSAAKTQLNCPEGQIQPQDLISFSQSQVDYILGENPKYISYLVGFGQNYPLHVHHRGASIASIFSLQSEVGCTQGFDAWYNSAEANPNVIYGGLVGGPDGNDAFSDERSNYEQTEPTLAGNAPLVAIFAKLQSLYGNIGSYHRNEVPVPQQKTPNTGTWKTQAPKTSEVAGVPVEFLHSITTSWSVGDATYYRHRVIIKNTSLKPISNLNLVIENLSGSLWGLSPTKEKNTYELPQWLKVLNPASEYMFVYVQGGDQAKISIQSFH 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0070 627 Pfam Glycosyl hydrolase family 9 29 488 IPR001701 GO:0004553|GO:0005975
Lal2g0070 627 PANTHER ENDOGLUCANASE 5 9 582 - -
Lal2g0070 627 SMART CBM49_2 535 617 IPR019028 GO:0030246
Lal2g0070 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 465 483 IPR033126 -
Lal2g0070 627 Gene3D - 26 496 IPR012341 GO:0005975
Lal2g0070 627 SUPERFAMILY Six-hairpin glycosidases 26 498 IPR008928 GO:0005975
Lal2g0070 627 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Lal2g0070 627 Pfam Carbohydrate binding domain CBM49 536 614 IPR019028 GO:0030246
Lal2g0070 627 PANTHER ENDO-1,4-BETA-GLUCANASE 9 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0070 Lal-Chr2 399835 403994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0070 27 627 Glycoside Hydrolase AT1G48930 66.172 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0070 K01179 - gmx:100802420 1028.08