Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0061 ATGGGTGAAGAATGTATATTGAAAGGTGGGAAGGCTACCATATTAGCACTTGGCAAGGCATTCCCTCACCAGCTTGTAATGCAAGAGTATTTAGTTGATGGATATTTCAGGGACACCAACTGTGACAATCTTGAGCTCAAGCAGAAGCTCTCTAGACTTTGTAAGCATCCCATTTCCCCTTTTTATACATTTATGTCCTCGAAAACGTATGTCTATTTGCGGGGCAAGACAACCACAGTGAAAACAAGATATGTGGTTATGTCTGAGGAGATACTGAAAAAGTACCCAGAACTTGCAGTCGAGGGCATTCCCACTGTGACACAGCGGCTTGAGATATGTAACAAGGCAGTGACACAAATGGCAATTGAAGCATCTAAAGCTTGCATCAAGAACTGGGGTGGATCTTTATCAGATATAACACACTTGGTTTATGTTTCATCCAGTGAAGCTAGACTTCCTGGTGGTGACATCTATCTAGCCACAGGACTAGGAATGAACCCTAAAACTCAACGAACCATGCTCTATTTTGTGGGGTGCTCTGGCGGTGTGGCCGGCCTACGTGTTGCAAAAGATATAGCTGAAAACAACCCCGGAAGCCGAGTGCTGCTTACTACTTCTGAAACGACAATTATTGGATTCAAGCCACCAAGTGCTGATAGGCCATATGACCTTGTAGGGGTGGCACTTTTCGGGGATGGTGCTGGTGCCATGATCATTGGCACAGATCCAATAGTGGAAACTGAGAAGCCTCTGTTCGAGCTTCACACAGCAGTTCAAGAGTTTTTGCCAGATACAGAGAAGAAAATTGATGGGAGGTTGACAGAAGAGGGGATAAGTTTCAAGCTAGCAAGGGAACTTCCACAGATTATAGAAGACAATGTTGAAGGATTCTGTGATAGATTAATGGATGTTGTTGGGTACCAGAACAAGGACTACAACAAGCTATTTTGGGCAGTTCATCCAGGTGGTCCTGCAATCTTGAACCGAATTGAGAAGAGACTTGATTTGTTGCCAGAGAAGCTGAATGCAAGTAGAAGAGCTCTAATGGATTATGGCAATGCCAGTAGTAATACCATTGTGTATGTGCTGGAGTATATGATAGAAGAGGGCATCAAGATTAGGAAGGATGGTGGAGAAGATCCTGAATTTGGCTTCATACTTGCTTTTGGACCTGGGATTACTTTTGAGGGAATTCTAGCCAGGAACCTGTGTGCTTCATGTAACTCTTAG 1230 0.439 MGEECILKGGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNLELKQKLSRLCKHPISPFYTFMSSKTYVYLRGKTTTVKTRYVVMSEEILKKYPELAVEGIPTVTQRLEICNKAVTQMAIEASKACIKNWGGSLSDITHLVYVSSSEARLPGGDIYLATGLGMNPKTQRTMLYFVGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGTDPIVETEKPLFELHTAVQEFLPDTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCDRLMDVVGYQNKDYNKLFWAVHPGGPAILNRIEKRLDLLPEKLNASRRALMDYGNASSNTIVYVLEYMIEEGIKIRKDGGEDPEFGFILAFGPGITFEGILARNLCASCNS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0061 409 Gene3D - 3 250 IPR016039 GO:0016746
Lal2g0061 409 Gene3D - 251 402 IPR016039 GO:0016746
Lal2g0061 409 Pfam Chalcone and stilbene synthases, N-terminal domain 9 57 IPR001099 -
Lal2g0061 409 Pfam Chalcone and stilbene synthases, N-terminal domain 76 243 IPR001099 -
Lal2g0061 409 CDD CHS_like 12 399 - -
Lal2g0061 409 SUPERFAMILY Thiolase-like 250 401 IPR016039 GO:0016746
Lal2g0061 409 SUPERFAMILY Thiolase-like 9 246 IPR016039 GO:0016746
Lal2g0061 409 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 75 404 IPR011141 GO:0009058|GO:0016747
Lal2g0061 409 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 7 56 IPR011141 GO:0009058|GO:0016747
Lal2g0061 409 Pfam Chalcone and stilbene synthases, C-terminal domain 253 403 IPR012328 -
Lal2g0061 409 PIRSF PKS_III 5 58 IPR011141 GO:0009058|GO:0016747
Lal2g0061 409 PIRSF PKS_III 73 404 IPR011141 GO:0009058|GO:0016747
Lal2g0061 409 PANTHER TYPE III POLYKETIDE SYNTHASE B 75 404 - -
Lal2g0061 409 PANTHER TYPE III POLYKETIDE SYNTHASE B 7 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0061 Lal-Chr2 346916 348423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0061 101 376 Miscellaneous Gene Families AT4G34250 23.779 8.14e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0061 - - vun:114168705 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0061 2 346916 348423 Lal2g0061 2 346916 348423 ECH