Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0058 ATGGATGCTTTGTTCTTGACTAAACCACCTTCTCACCTCAATCTCTCTCCCCATCTCACCAAACTCCCATTCTCTCCTATTTTCCCTTCCCACTATCCCTTTCGCCCCAAACACACTCACTCTTTCCTTACACTCTCTTCTCTCCAAAATCAACACCAACCACCTCAACAAACCACCACTGAAGATGAATCCTACGGCGAAGTTAAACGAATCATCGGAAGCAGAGCCCTTAATGGCGCCACCGGTATGGAATATCTCATCGAGTGGAAAGACGGTCACACCCCTTCCTGGGTCCCTTCCGACTTCATAGCCGGAGACGTCCTCGCCGATTACGAGGCTCCCTGGTGGACCGCCGCCAAGAAAGCCGACGAAGCCGCCTTCAAGAGCCTCATCGAAGTTGGCGACGAACGTGATGTCGACGCCGTCGATTCTGACGGCAGAACCGCTCTCATCTTCGTCTCCGGCCTCGGCTCAGAGCCATGCGTACGCCTCCTCGCTGAAGCCGGCGCCAACCTCGACCACCGCGAAAACAGCGGCGGACTCACCGCGCTGCACATGGCTGCCGGTTATGTAAAACCCGGCGTCGCAAAACTTCTGTTAGATGAAGGCGCAGATCCTGAAATTGAAGACGATAGAGGACGAACGCCTTTGGATCTTGCTAGGGAGATTCTGAAGGTAACACCGAAGGGGAATCCGATGCAATTCGGAAGAAGAATCGGACTCGAAGGAGTGGTTAGGGCGAGGTTTGTGGCGGAGGAATTGGTGAGGGATTATGAGGCTGGGCTTGAGTACGCGGTGGCAGAAGCGGTGGTTGATAGCAGAAGCGGTGATGATGGGAAGTTGGAGTTTTTGATTAAATGGGCTGATCTGGATGAGCCCACTTGGGAGCCTGAAGATAATGTGGATGATGAACTTATTAAGGAGTTTCAGCTCAGTAGTAACAATGTTGTTAGTTCTAACCAGGAGAACGCATAA 975 0.5241 MDALFLTKPPSHLNLSPHLTKLPFSPIFPSHYPFRPKHTHSFLTLSSLQNQHQPPQQTTTEDESYGEVKRIIGSRALNGATGMEYLIEWKDGHTPSWVPSDFIAGDVLADYEAPWWTAAKKADEAAFKSLIEVGDERDVDAVDSDGRTALIFVSGLGSEPCVRLLAEAGANLDHRENSGGLTALHMAAGYVKPGVAKLLLDEGADPEIEDDRGRTPLDLAREILKVTPKGNPMQFGRRIGLEGVVRARFVAEELVRDYEAGLEYAVAEAVVDSRSGDDGKLEFLIKWADLDEPTWEPEDNVDDELIKEFQLSSNNVVSSNQENA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0058 324 Gene3D - 111 250 IPR036770 -
Lal2g0058 324 ProSiteProfiles Ankyrin repeat profile. 145 177 IPR002110 GO:0005515
Lal2g0058 324 SMART ANK_2a 110 141 IPR002110 GO:0005515
Lal2g0058 324 SMART ANK_2a 145 174 IPR002110 GO:0005515
Lal2g0058 324 SMART ANK_2a 179 208 IPR002110 GO:0005515
Lal2g0058 324 CDD CD2_cpSRP43_like 64 113 - -
Lal2g0058 324 ProSiteProfiles Chromo and chromo shadow domain profile. 265 324 IPR000953 -
Lal2g0058 324 SUPERFAMILY Chromo domain-like 267 310 IPR016197 -
Lal2g0058 324 Pfam Chromo (CHRromatin Organisation MOdifier) domain 267 310 IPR023780 -
Lal2g0058 324 PANTHER HOMEOBOX PROTEIN WARIAI 245 321 - -
Lal2g0058 324 PANTHER HOMEOBOX PROTEIN WARIAI 1 246 - -
Lal2g0058 324 SMART chromo_7 263 314 IPR000953 -
Lal2g0058 324 SMART chromo_7 64 116 IPR000953 -
Lal2g0058 324 ProSiteProfiles Ankyrin repeat profile. 179 211 IPR002110 GO:0005515
Lal2g0058 324 CDD CD3_cpSRP43_like 262 311 - -
Lal2g0058 324 Gene3D - 257 311 - -
Lal2g0058 324 Pfam Ankyrin repeats (many copies) 165 220 IPR002110 GO:0005515
Lal2g0058 324 SUPERFAMILY Chromo domain-like 61 115 IPR016197 -
Lal2g0058 324 SUPERFAMILY Ankyrin repeat 114 222 IPR036770 -
Lal2g0058 324 ProSiteProfiles Ankyrin repeat region circular profile. 179 211 - -
Lal2g0058 324 Gene3D - 62 110 - -
Lal2g0058 324 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 1 246 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Lal2g0058 324 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 245 321 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0058 139 220 Acyl Lipid Metabolism Gene Families AT5G53470 34.146 1.38e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0058 K12271 - zju:107427356 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0058 2 338203 339482 Lal2g0058 2 338203 339482 ECH