Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0039 GGAAAGGAAGGAAGAAAGCAAAGCAAAGCAAAACGCAACGCAATTCTATTCTCCTTCCTATTCCTTCCCTTTGGCGAAGAAAGAGCGATGGGTCAAACATTTCGGAAGCTGTTTGATACCTTCTTCGGCAATACCGAGATGCGGGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACTACTATACTTTACAAGCTCCACATTGGAGAGGTTTTATCTACTGTTCCTACCATTGGTTTCAATGTGGAGAAGGTTCAGTATAAGAATGTTATTTTCACGGTTTGGGATGTTGGAGGTCAAGAGAAATTAAGGGCACTTTGGAGGCACTATTTTAACAACACAGATGGTCTGATATATGTTGTTGACAGTCTGGACCGTGAGAGACTTGGAAAAGCAAAGCAGGAATTTCAGAATATCATAAGTGACCCATTTATGCTCAACAGTGTCATCTTGGTGTTTGCCAACAAACAGGACCTGAGAGGAGCGATGACACCAAGGGAAGTATGTGAAGGATTAGGTCTTTTTGATCTCAAGAATAGAAAATGGCACATTCAAGCGACTTGTGCGCTCAAGGGTGATGGCCTATATGAGGGCTTGGACTGGTTGTCCACAACTCTGAAGGAGAGAAAAGCTGCTGGATACTCTTCAATAGCACTAGGAACCTCATCCTTCTAA 675 0.4326 GKEGRKQSKAKRNAILFSFLFLPFGEERAMGQTFRKLFDTFFGNTEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRALWRHYFNNTDGLIYVVDSLDRERLGKAKQEFQNIISDPFMLNSVILVFANKQDLRGAMTPREVCEGLGLFDLKNRKWHIQATCALKGDGLYEGLDWLSTTLKERKAAGYSSIALGTSSF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0039 224 ProSiteProfiles small GTPase Arf family profile. 40 206 - -
Lal2g0039 224 PANTHER ADP-RIBOSYLATION FACTOR B1C 30 217 - -
Lal2g0039 224 SMART arf_sub_2 30 210 - -
Lal2g0039 224 CDD Arf1_5_like 47 205 IPR045872 GO:0003924
Lal2g0039 224 Gene3D - 32 216 IPR027417 -
Lal2g0039 224 PRINTS GTP-binding SAR1 protein signature 48 71 IPR006689 GO:0003924|GO:0005525
Lal2g0039 224 PRINTS GTP-binding SAR1 protein signature 76 100 IPR006689 GO:0003924|GO:0005525
Lal2g0039 224 PRINTS GTP-binding SAR1 protein signature 103 128 IPR006689 GO:0003924|GO:0005525
Lal2g0039 224 PRINTS GTP-binding SAR1 protein signature 148 169 IPR006689 GO:0003924|GO:0005525
Lal2g0039 224 PANTHER ADP RIBOSYLATION FACTOR-RELATED 30 217 IPR024156 GO:0005525
Lal2g0039 224 TIGRFAM small_GTP: small GTP-binding protein domain 45 166 IPR005225 GO:0005525
Lal2g0039 224 SMART sar_sub_1 38 206 IPR006689 GO:0003924|GO:0005525
Lal2g0039 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 210 IPR027417 -
Lal2g0039 224 Pfam ADP-ribosylation factor family 35 205 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0039 Lal-Chr2 240751 243818 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0039 K07937 - gmx:100499903 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0078 1 575278 579403 Lal2g0039 2 240751 243818 LSH