Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0023 ATGAATTCCCCTGTTTCAAAATTCGAACTTTCTAATTCTAGTCCGTCCTTCTCTGCACCGTGTTCAAGTCATGGTAATAGCAGCGTTAACAGCAGTTGTAGCAACAGTGAAACCGATGAAAGCCCTATTTCCTCTCAACGTTTTTCAATCCAAGATGTCAAATATCAATTCCCAACAAAATGCATTAGCTTGCCCAATTCACATTCGCATCGATCCTTAGCTGTTCTTTCAGGCCATGTTGGTACTGTTTCATGCTTAGCCGTGTGTGGAGAATTCATACTCAGTGCTTCCCAGGGAAAAGACATCATAGTGTGGCAACAACCTGATTTGAGGTTGTTCGCAAAGTTCGGTCATGGTGATGGTTCTGTCAAAGCCCTTGTATCCGTTGGGAACAAGGTTTTCACCGCACACCAAGATAGCAGGATCAGGGTTTGGAAAGTTTCAAGGAGATCAGAGAATGTGTTCAAACTTGCTGATACTCTTCCAACAACTAAGGACTATTGGGGGAAATTCATGAAGCAAAGCAATTATGTTCAAACTAGGAGGCACCACAAGCGTTTGTGGATTGAACACGCTGATAGCATTTCTTGTTTGACTGTTTATAATGGTTTGATTTATTCAGGTTCTTGGGATAAGACCCTTAAGGTTTGGAGGGTCTCGGATTTGAAGTGTTTGGAGTCAATTAAGGCGCATGATGATGCTATTAATGGATTGGTAGCAGGTAAAGGGGTTGTGTATTCTGCTTCTGCTGATGGAAAGATTAAAGCTTGGGGGAAAGAAGGGAAGAATGATTCACATTGCTTAAAAGGGGCACTTCTAGGCCATAAAGATGTTTCTTTTAATTCTGTGGTAGTTTCTGATGATGGGAAATGGGTTTATGGAGGGGGTTCCGATGGTTTTGTTATAGGGTGGGAGGTAGATGGGAGTTTTGAAAGTTGGAAACTTGTTTCTGAGACTAGGGCACATGAAATGGCTGTTTTGTGTATGTGCTTAACGGGAGAGTTTTTATGCAGTGGATCAGCTGATAAAAACATTGGTATTTGGAAGAGAGAGGCTTTTGGGAAGCTTTGTAAAGTTGGTGTCATAGGTGGCCATGAAGGGCCAGTGAAATGTTTGCAAGCATCATGTAATAGAATTCGTGATGGGTTTATGCTCTATAGTGGAAGCCTTGACAGAAAGGAAGAGCAAAGCAAGCATGCTTTAAAAGTGGCTATAGCTTCAGCTGCTGAGGTTGTTAGAATCCTAGCAGGAATTATGGTCCTCATTACCAGAGGAAGGTTGAAGCACTCTTATATGGCAAACAAAGCCTATTGCATACTCTATGGTTCCATAATAAAGGATGTTAGCATCAATTCAGATTGTTTTGATGAATTTACCCTTAGCCATGCAGCAACAGACTTTGGCAACAGATACCAATATCATCCAATGGTAGTGCTGCATCCAGAATCAGTTTCTGATATTGCAGCCACAATACAGCATATCTGGCTCATGGGACCTAGCTCCCAACTCACCGTTGCGGCCAGAGGCCATGGCCACTCACTCCATGGCCAGGCACAAGCTCAAGGAGGTGTTGTGATCAACATGGAATCACTCAAGGTCCCAGAAATGCAGGTACATGTAGGAAATTCTCCATATGTGGATGTCTCAGGTGGTGAGTTGTGGATAAACATCCTGCATGAGACTTTAAAATATAGGTTGGCACCAAGATCATGGACAGATTATTTGCATCTGACAGTTGGTGGCACTCTCTCTAATGCCGGAGTCAGCGGGCAGGCATTTCGGCATGGTCCTCAGATAAGTAATGTGAAGCAGCTGGAGATTGTTACAGGAAAAGGAGAGGTGGTCAATTGTTCCAAGGAGCAGAATGGGGAGCTCTTTCACAGTGTTCTTGGGGGGCTTGGCCAGTTTGGAATTATAACCCGGGCAAGAATTCTGCTGGAACAAGCACCTGACATGGTAAAATGGATAAGAGTGCTATATTCAGATTTCACAGCATTCACAAGAGACCAAGAGCAATTAATATCATCTGAAAACTCATTTGATTACATTGAAGGATTTGTGATAATAAACAGAACTGGTCTGCTAAATAACTGGAGACCATCCTTCAACCCACAAGACCCTGTTCAGGCTAGTCAGTTCAACTCAGATGGAAAGACTCTCTACTGCCTAGAATTAGCCAAGTACTTCACCTTGGAAGAAATCAATGTAGTAAATCAGGAAGTTGAGATGCACTTATCCCATTTAAACTACATTCCATCAACTCTTTTTCTAACACAAGTCAATTACCTAGACTTCTTAGACAGGGTGCATGTATCCGAGGTCAAATTGCGTTCAAAAGGTTTGTGGGATGTACCACACCCATGGCTTAATCTTTTTATACCCAAAAGCAAAATACACCAATTTGCAGAAGTCATCTTCGGGAATATCCTAACAGAAACAAGCAATGGCCCTGTCCTTATCTACCCAGTAAATAAATCAAAGTGGGACAAAAGAACTTCGGTTGTTATTCCAGAGGAAGACATTTTCTACTTAGTGGCATTCCTTACTTCTGCAGTTCCCTCTTCCAATGGAACTGATGGCCTAGAACACATAATAAGTCAGAACAAAAGAATTGTAGAATACTGTGAAAGAGCACAACTTGGAGTAAAGCAATATTTGCCACACTACAGATCACAGGAAGAATGGAGGGCCCATTTTGGTCCTGAGTGGGAGGCTTTTGTGCAAAGAAAATATGTTTATGACCCATTGGCAATACTTGCTCCTGGCCAGAGAATATTTCAAAAAGCAATAACCTTCTCATGA 2802 0.4218 MNSPVSKFELSNSSPSFSAPCSSHGNSSVNSSCSNSETDESPISSQRFSIQDVKYQFPTKCISLPNSHSHRSLAVLSGHVGTVSCLAVCGEFILSASQGKDIIVWQQPDLRLFAKFGHGDGSVKALVSVGNKVFTAHQDSRIRVWKVSRRSENVFKLADTLPTTKDYWGKFMKQSNYVQTRRHHKRLWIEHADSISCLTVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAGKGVVYSASADGKIKAWGKEGKNDSHCLKGALLGHKDVSFNSVVVSDDGKWVYGGGSDGFVIGWEVDGSFESWKLVSETRAHEMAVLCMCLTGEFLCSGSADKNIGIWKREAFGKLCKVGVIGGHEGPVKCLQASCNRIRDGFMLYSGSLDRKEEQSKHALKVAIASAAEVVRILAGIMVLITRGRLKHSYMANKAYCILYGSIIKDVSINSDCFDEFTLSHAATDFGNRYQYHPMVVLHPESVSDIAATIQHIWLMGPSSQLTVAARGHGHSLHGQAQAQGGVVINMESLKVPEMQVHVGNSPYVDVSGGELWINILHETLKYRLAPRSWTDYLHLTVGGTLSNAGVSGQAFRHGPQISNVKQLEIVTGKGEVVNCSKEQNGELFHSVLGGLGQFGIITRARILLEQAPDMVKWIRVLYSDFTAFTRDQEQLISSENSFDYIEGFVIINRTGLLNNWRPSFNPQDPVQASQFNSDGKTLYCLELAKYFTLEEINVVNQEVEMHLSHLNYIPSTLFLTQVNYLDFLDRVHVSEVKLRSKGLWDVPHPWLNLFIPKSKIHQFAEVIFGNILTETSNGPVLIYPVNKSKWDKRTSVVIPEEDIFYLVAFLTSAVPSSNGTDGLEHIISQNKRIVEYCERAQLGVKQYLPHYRSQEEWRAHFGPEWEAFVQRKYVYDPLAILAPGQRIFQKAITFS 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0023 933 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 227 IPR001680 GO:0005515
Lal2g0023 933 PANTHER GULONOLACTONE OXIDASE 454 930 - -
Lal2g0023 933 SMART WD40_4 312 349 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 221 258 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 109 146 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 69 106 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 355 416 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 265 305 IPR001680 GO:0005515
Lal2g0023 933 SMART WD40_4 181 218 IPR001680 GO:0005515
Lal2g0023 933 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 475 510 IPR006093 GO:0016491
Lal2g0023 933 SUPERFAMILY FAD-linked oxidases, C-terminal domain 650 926 IPR016164 GO:0003824|GO:0050660
Lal2g0023 933 Pfam WD domain, G-beta repeat 190 217 IPR001680 GO:0005515
Lal2g0023 933 Gene3D - 50 165 IPR015943 GO:0005515
Lal2g0023 933 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 650 926 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lal2g0023 933 ProSiteProfiles PCMH-type FAD-binding domain profile. 471 649 IPR016166 GO:0071949
Lal2g0023 933 Pfam FAD binding domain 476 618 IPR006094 GO:0050660
Lal2g0023 933 Gene3D - 528 651 IPR016169 -
Lal2g0023 933 SUPERFAMILY WD40 repeat-like 71 392 IPR036322 GO:0005515
Lal2g0023 933 Gene3D - 166 414 IPR015943 GO:0005515
Lal2g0023 933 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 454 930 - -
Lal2g0023 933 SUPERFAMILY FAD-binding/transporter-associated domain-like 455 646 IPR036318 GO:0050660
Lal2g0023 933 MobiDBLite consensus disorder prediction 1 44 - -
Lal2g0023 933 Gene3D - 652 885 IPR016170 -
Lal2g0023 933 Gene3D - 461 926 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0023 Lal-Chr2 154640 162010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0023 191 372 Miscellaneous Gene Families AT5G08390 28.042 3.74e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0023 K00279 - gmx:100808619 857.055