Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0014 ATGAACTTGAGCATGGCTACTATTACTACTACTACTACTACTACTTGTTCATCATCCCTCATGTTCTCTCATCTTCAAGATTCCTCTATTCGTTCATCTCTCTCTTTTAACCCTCTCTCTAGAACCTTCTCTCTCCTTCTCAGGTACCCCAACTCCATCCATCTCAATTTCCGCAGGCAACCCACCACTTCTTTCCACGCTCTCCTCGCTGCTGAGGTCCAAGTTACTCAAACCGTTGAAGAAGAGGATGTTGTTGAAGAGCAAGAAGTGGAGGATGGGCCCACCATTATCAACAAGCCTAAGAAAGGGAAGGCTGCATTGCCTCTCAAGAGGGATAGGCTGAGGTCTAAGAGGTTCCTTGAAATTCAAAATTTGAGGGAGCATAAGAAAGAATATGACTTGAACACAGCAATATCATTGGTTAAACAAACTGCTAAAACCAAGTTTGTAGAAACAGTAGAAGCCCATTTCCGTCTCAACATTGACCCTAAATACAATGACCAACAGTTAAGGGCAACCGTAAGTCTTCCAAAGGGAACTGGAAAGCCTGTTAAAGTCGCTGTTCTTACCCAAGGTGAAAGATTCGATGAAGCAAAAAATGCGGGAGCTGATTTGGTGGGTGGAGAGGACCTGATAGAACAGATTAAAGGAGGGTTCATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTAGCCTTGGAAAGATCCTGGGGCCAAGAGGACTGATGCCAAATCCAAAAGCTGGCACTGTCACACCTAATATTCCTCAGGCTATAGCAGAATTCAAACAGGGAAAAGTTGAATTCAGGGCAGACAAAACTGGAATTGTGCACTTACCTTTTGGAAAAGCTGATTTTCCAGAAGAGGATCTTCTTGTCAACTTGCTTGCTGCAATAAGATCAGTAGAGGCAAACAAACCATCAGGAGCAAAAGGTGTGTACTGGAAAAGCGCACATGTATGCTCGGCAATGGGTCCTTCGATTAGGTTAAATATCAGGGAGATGCTTGATTACAAGCTTCCATCAGAATAG 1047 0.4327 MNLSMATITTTTTTTCSSSLMFSHLQDSSIRSSLSFNPLSRTFSLLLRYPNSIHLNFRRQPTTSFHALLAAEVQVTQTVEEEDVVEEQEVEDGPTIINKPKKGKAALPLKRDRLRSKRFLEIQNLREHKKEYDLNTAISLVKQTAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEFRADKTGIVHLPFGKADFPEEDLLVNLLAAIRSVEANKPSGAKGVYWKSAHVCSAMGPSIRLNIREMLDYKLPSE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0014 348 Hamap 50S ribosomal protein L1 [rplA]. 110 340 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lal2g0014 348 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 129 340 - -
Lal2g0014 348 SUPERFAMILY Ribosomal protein L1 118 337 IPR023674 -
Lal2g0014 348 TIGRFAM rplA_bact: ribosomal protein uL1 115 339 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Lal2g0014 348 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE 129 340 - -
Lal2g0014 348 ProSitePatterns Ribosomal protein L1 signature. 232 250 IPR023673 -
Lal2g0014 348 CDD Ribosomal_L1 134 335 IPR028364 -
Lal2g0014 348 Pfam Ribosomal protein L1p/L10e family 142 331 IPR028364 -
Lal2g0014 348 Gene3D - 179 270 IPR016095 -
Lal2g0014 348 Gene3D - 132 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0014 Lal-Chr2 93394 97162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0014 K02863 - gmx:100808549 492.656