Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0010 ATGGCAAGATTGTCATTATTATTGATAGCCACAGTGTTGGTGATGGTGATGGTGGCAATGGCGAATGCAGCTACACTTAATTATAAAGAAGCTTTGACAAAGAGCATTTTGTTTTTTGAAGGCCAGAGGTCAGGGTACTTGCCATCTTCTCAACGCATGACATGGCGAAAAAACTCTGCCCTTCATGATGGCTCTGATCTTAATATTGATATGGTAGGTGGATACTATGATGCTGGTGACAATGTGAAATTCCATTTTCCAATGGCGTTCACAACCACCTTGCTAGCTTGGAGTGTGATAGAATTTGGAGATAAGATGGATTCAGATCTGCAATATGCATTGGAAGCTATTCGGTGGGGAACTGACTATTTCCTTAAAGCTACAGAGAAAGCAGATATGGTTGTAGGACAAGTTGGAGAATCTAATGGTGATCATGCTTGTTGGCAGAGGCCAGAAGACATGGACACTTCTAGGCAGACATATGTTCTCACTACAGATAAACCAGGTTCAGATGTCTCTGCTGAGATTGCAGCTGCACTTGCTGCATCTTCCATTGTATTTCAGAATACCGATTATACCTATTCTCAGCTGCTTCTCGCCAGGGCCAAACAGGTGTTTGACTTTGCAAACAAGTATCGTGGAAAATATAGTGATAGCATAGGTGATGCGTGTCCTTTCTACTGTGAAGATCAGTACATGGACGAGTTGGTTTGGGGAGCAGCATGGGTGTATAAGGCGACTAAGCAGACAGATGATTATTATTGGAATTTTGTTAAGGAAAACATAAATAACATTGGTACAGGTTTTGCTGAATTTGGCTGGGCTAACAAGGATGCTGGCATTAATGTGCTTGTTTCTCAGTGGGTGATGAATGATCAATCGAAGTCAACTCCCTTCGTTGATAGTGCAAACCGCTTCATCTGCTCTTTGTTTCCAGAGTCGAACATGACATCAGTCTGGTATAGTAAAGGTGGGCTTCTATTCAGACCTGGAGGAAGTAACTTACAACACGCAACATCTCTATCTTTTCTGATGATTGTTTATGCACGCTACTTGAATAATGCGGGCCAAGAAATACATTGTGAAAATAATCAGCTCTCTGTCTCCTCATCCAAACTCATAGAACTCGCAAAATCTCAGGTGGATTACATATTAGGACAAAACCCGCTAGGGCTGTCATATATGGTGGGTTATGGAGACAAGTTTCCTCAGAAGATACACCATCGCGGTTCAACAGTGCCATCTTTGGATGATCACCCACAACATATTCAATGTTTTGAGGGATACAATTATTTCAATTTATCAACTCCTGATCCCAACATCCTTACCGGTGCTGTAGTTGGAGGGCCTGCAGATGATGATACTTTTCAAGACTCTCGTTTTAATGTTGCACAATCTGAGCCAACAACTTATATCAATGCTCCTTTTGTTGGTGTATTGGCTTACTTCACTACGCCCGATATACATTAG 1470 0.4177 MARLSLLLIATVLVMVMVAMANAATLNYKEALTKSILFFEGQRSGYLPSSQRMTWRKNSALHDGSDLNIDMVGGYYDAGDNVKFHFPMAFTTTLLAWSVIEFGDKMDSDLQYALEAIRWGTDYFLKATEKADMVVGQVGESNGDHACWQRPEDMDTSRQTYVLTTDKPGSDVSAEIAAALAASSIVFQNTDYTYSQLLLARAKQVFDFANKYRGKYSDSIGDACPFYCEDQYMDELVWGAAWVYKATKQTDDYYWNFVKENINNIGTGFAEFGWANKDAGINVLVSQWVMNDQSKSTPFVDSANRFICSLFPESNMTSVWYSKGGLLFRPGGSNLQHATSLSFLMIVYARYLNNAGQEIHCENNQLSVSSSKLIELAKSQVDYILGQNPLGLSYMVGYGDKFPQKIHHRGSTVPSLDDHPQHIQCFEGYNYFNLSTPDPNILTGAVVGGPADDDTFQDSRFNVAQSEPTTYINAPFVGVLAYFTTPDIH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0010 489 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 383 409 IPR018221 -
Lal2g0010 489 PANTHER ENDO-1,4-BETA-GLUCANASE 11 485 - -
Lal2g0010 489 SUPERFAMILY Six-hairpin glycosidases 27 484 IPR008928 GO:0005975
Lal2g0010 489 Pfam Glycosyl hydrolase family 9 28 480 IPR001701 GO:0004553|GO:0005975
Lal2g0010 489 Gene3D - 24 486 IPR012341 GO:0005975
Lal2g0010 489 PANTHER ENDOGLUCANASE 11 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0010 Lal-Chr2 56467 58902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0010 1 485 Glycoside Hydrolase AT1G70710 54.990 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0010 K01179 - gmx:100814370 627.476