Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0005 ATGGCTGATACTGAATCAAATCCGTCTCTTCATCCTCCTCCTTCTGTTACTGTCACAGAAACAGATCTATCACCCACTCTTGTAACTCCTCAGCTTCAAGAGTCAACTCACACCACCACCACCACCACCACCACTGATTTGAATGATGTTGTAGAAGAAAAAGAAGAAGCATCTGCTACTGCTACTGCTAATGATTCTGCTGCTGCTGCTGCTGCTTCGTCAGCGTCATCATCCACTTCCCACAAGATGATTATTCCGCACAATCTCCTTTCATTCAAGGAAGAGAGCAATAATGTTTCTGATCTCTCCGATCCCCAAAAAAACTCTCTTCAACAACTCAAGAACCTCCTCACTGCTGATCCCAAATATGAGGTTTCCATTTGGGGAGTTCCTCTTCTCAAAGATGATAGGACTGACATCATCCTCCTCAAGTTCCTCAGAGCTCGTGACTTCAAAGTCAAGGATGCACTCACCATGATTACTAACACCCTCACATGGCGAAAGGATTTTGACATAGATGCACTCATTGATGAAGATCTAGGTGATGAATTTGACAAGGTGGTGTTCATGCACGGTTATGATAGAGAAGGTCATCCAGTCTGTTATAATGTCTATGGTGAGTTTCAGAACAATGAACTCTATCACAAGGCTTTCTCTAATCAGGAAAGGACAAACAAGTTTCTTAGATGGAGGATTCAGTTCTTGGAAAGGAGTATCAGGAACCATCTTCATTTCACTCAAGATGGGATTAATACAATTCTCCAAGTCAATGACTTTCACAACTCTCCTGGTCCTGCTAAACGCCAACTTCGAATTGCCACCAAACAAGCCTTGCAATTACTTCAGGACAATTATCCCGAGTTCGTCTCTAAACAGGTTTTCATCAATGTACCTTGGTGGTATCTTGCATTCTATACCATGATCAGTCCCTTCATGACACACAGAACCAAAAGCAAATTTGTGTTCGCAGGACCATCCAAGTCTCCCGATACACTTTTCAAGTATATATCTCCTGAGCAAGTGCCCGTACAGTATGGTGGCCTAAGTGTTGATTTTTGTGATTGCAATCCTGATTTCAGTATGTCTGATCCTATCACAGAGATTCCTCTAAAGCCAAACACAAAACAGACCGTAGAAATTGCTATTTATGAGAGATGCATTATTGTTTGGGAGCTGCGAGTGGTGGGCTGGGAGGTTAGCTATAGTGCTGAATTCAAGCCTGATGCTAAAGATGGATATACAGTTATTATCCAAAAAGCCACAAAGATGTCCCCTACTGATGAACCAGTGATTTCCAATAGCTTTAAAGTTGGTGAACTCGGCAAATTATTCCTCACAGTCGACAATCCCACCTTGAAAAAGAAGAGGATTCTTTACAGATTCAAGATCAAGCCCTATTCTGATTGA 1407 0.4208 MADTESNPSLHPPPSVTVTETDLSPTLVTPQLQESTHTTTTTTTTDLNDVVEEKEEASATATANDSAAAAAASSASSSTSHKMIIPHNLLSFKEESNNVSDLSDPQKNSLQQLKNLLTADPKYEVSIWGVPLLKDDRTDIILLKFLRARDFKVKDALTMITNTLTWRKDFDIDALIDEDLGDEFDKVVFMHGYDREGHPVCYNVYGEFQNNELYHKAFSNQERTNKFLRWRIQFLERSIRNHLHFTQDGINTILQVNDFHNSPGPAKRQLRIATKQALQLLQDNYPEFVSKQVFINVPWWYLAFYTMISPFMTHRTKSKFVFAGPSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFSMSDPITEIPLKPNTKQTVEIAIYERCIIVWELRVVGWEVSYSAEFKPDAKDGYTVIIQKATKMSPTDEPVISNSFKVGELGKLFLTVDNPTLKKKRILYRFKIKPYSD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0005 468 Pfam CRAL/TRIO, N-terminal domain 110 162 IPR011074 -
Lal2g0005 468 MobiDBLite consensus disorder prediction 1 47 - -
Lal2g0005 468 PANTHER PATELLIN-1 121 468 IPR044834 GO:0008289
Lal2g0005 468 PANTHER PATELLIN-1 33 118 IPR044834 GO:0008289
Lal2g0005 468 Pfam CRAL/TRIO domain 186 347 IPR001251 -
Lal2g0005 468 Gene3D - 95 382 IPR036865 -
Lal2g0005 468 MobiDBLite consensus disorder prediction 1 65 - -
Lal2g0005 468 ProSiteProfiles GOLD domain profile. 358 463 IPR009038 -
Lal2g0005 468 SMART sec14_4 181 350 IPR001251 -
Lal2g0005 468 SMART CRAL_TRIO_N_2 138 163 IPR011074 -
Lal2g0005 468 PANTHER PATELLIN-3 121 468 - -
Lal2g0005 468 PANTHER PATELLIN-3 33 118 - -
Lal2g0005 468 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 177 347 IPR001251 -
Lal2g0005 468 CDD SEC14 183 348 IPR001251 -
Lal2g0005 468 SUPERFAMILY CRAL/TRIO domain 187 356 IPR036865 -
Lal2g0005 468 SUPERFAMILY CRAL/TRIO N-terminal domain 96 179 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0005 Lal-Chr2 39414 41760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0005 142 342 Acyl Lipid Metabolism Gene Families AT1G55840 30.374 5.31e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0005 - - gmx:100804006 634.024