Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1206 ATGTCCTTGCAGGCTTTTATTGATGTTGAGAAGGATTTGACAGAGCGAGAAACTACAATGGACAGATTAATATGTGGAGATGTTGGCTTCGGTAAAACTGAGGTTGCACTATGTGCTATCCACTGTGTCGTTTCCACCAAAAAACAAGCGATGGTTCTGGCACCAACAATAGTTCTAGCAAAACAGCATTATGATGTTATTTCTGAGCGCTTTTCTATCTACCCCGATATTAAAGTTGGACTACTAAGCAGGTTTCAGGGTTTACCATTTGATAACCCTTACACTGTGTTTTCAATTCAGAAAATGGAAGAAGAAATTCAATTCAATTGGGGTAAAAAGAGAGGAATCGGTGGTAAAAAGAAAGATGTTCAATTCTATGATTCATTCACTTATGATGGTGTTGAATACAAACTCTTTGATAATGTTTTTCTTCATAAGGATGGTGAATCTGATCCCTATATCGGTAAACTCATCAAGATTTGGGAACATCGTGATGCTTCTAAGAAAGTTAAAGTTCAATGGTTTTTCCGTCCTCATGAGATTAAGAACTTTCTAGAAGGAATCGAGAGTCCATGTGATAATGAATTGTTTCTTGCTTGTGGTGAAGGAGCTGGCCTTGCTAATGTCAATCCTTTGGAAGCTATTGCTGGAAAGTGCAATATAATTTGCAGTTCTAAGGACACAAGGAATAGACAACCATCGGACGAAGAACTCAAAATGGCCGAGTTTGTATTTTATCGTTTCTTTGATGTTGGATCTCGTAAAATAGTGGACAAGATAGATGACAAGATTGCTGGAGTAGATGGTATGTAG 813 0.3776 MSLQAFIDVEKDLTERETTMDRLICGDVGFGKTEVALCAIHCVVSTKKQAMVLAPTIVLAKQHYDVISERFSIYPDIKVGLLSRFQGLPFDNPYTVFSIQKMEEEIQFNWGKKRGIGGKKKDVQFYDSFTYDGVEYKLFDNVFLHKDGESDPYIGKLIKIWEHRDASKKVKVQWFFRPHEIKNFLEGIESPCDNELFLACGEGAGLANVNPLEAIAGKCNIICSSKDTRNRQPSDEELKMAEFVFYRFFDVGSRKIVDKIDDKIAGVDGM 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1206 270 ProSiteProfiles BAH domain profile. 134 260 IPR001025 GO:0003682
Lal25g1206 270 Pfam DEAD/DEAH box helicase 20 79 IPR011545 GO:0003676|GO:0005524
Lal25g1206 270 Pfam BAH domain 140 234 IPR001025 GO:0003682
Lal25g1206 270 SMART BAH_4 134 261 IPR001025 GO:0003682
Lal25g1206 270 Gene3D - 2 103 IPR027417 -
Lal25g1206 270 Gene3D - 104 258 IPR043151 -
Lal25g1206 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 89 IPR027417 -
Lal25g1206 270 PANTHER PROTEIN ANTI-SILENCING 1 102 268 - -
Lal25g1206 270 PANTHER PROTEIN ANTI-SILENCING 1 102 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1206 Lal-Chr25 15638576 15647879 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1206 - - qsu:112014130 246.514