Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1203 ATGTCGTCTCCAGACATTGCAGCAATTTTGGAGAATTCGAAGGAACTGGATCGGTTAAGGAAAGATCAGGAAGATATTCTTCTTGAGATCAACAAACTTCACAAAAAGCTTCAAACAATTTCCTCTCATTTGAATGCAGCTCCTGAAGTGGTTGAGAAGCCCGGGGATAACTCATTAGCAAGGCTTAAAGTGTTGTATACTCAAGCAAAAGATCTTTCAGACAGTGAAGCAAACATTTCCAATTTGTTGATAAGCCAACTTGATGCCATACTACCTCCAGGACCACAAGGGCAACCACGACGAAGAATAGAAGGTAATGAGCAGAAAAGGAAACGAGTGAAGACAGAGTCAGATATTTCAAGGCTAACTCCTAGTATGAGAAACCAACTTGAGGCTTGTGCCAGTCTTAAGGGTGAACAGGTCGCTGCGAGGGTCACTCCACGAAATGCTGTAAAGGACGAATGGTTTGTTGTAAAAGTGATTCATTTTGAAAAGGAATCAAAGGAATTCGAAGTACTAGATGAGGAACCAGGTGATGATGAAGATAGCAGTGGCCAAAGACAGTACAAGCTTCCCATGGGAAATATCATTCCTTTCCCTAAGAGTAATGATCCTTCAAGTGCCCCAGATTTTCCTCCCGGAAAGCATGTTTTGGCTGTATATCCAGGAACTACTGCACTTTATAAAGCAACGGTTGTTCATGGCCATCGGAAGAGGAAGACAGATGATTATGTGCTGGAATTTGATGATGATGAAGAAGATGGATCTTTACCACAAAGGACAGTGCCCTTCCACAAAGTGGTTCCTATGCCAGAAGGGCATCGCCCATGA 831 0.4284 MSSPDIAAILENSKELDRLRKDQEDILLEINKLHKKLQTISSHLNAAPEVVEKPGDNSLARLKVLYTQAKDLSDSEANISNLLISQLDAILPPGPQGQPRRRIEGNEQKRKRVKTESDISRLTPSMRNQLEACASLKGEQVAARVTPRNAVKDEWFVVKVIHFEKESKEFEVLDEEPGDDEDSSGQRQYKLPMGNIIPFPKSNDPSSAPDFPPGKHVLAVYPGTTALYKATVVHGHRKRKTDDYVLEFDDDEEDGSLPQRTVPFHKVVPMPEGHRP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1203 276 Pfam SGF29 tudor-like domain 137 271 IPR010750 -
Lal25g1203 276 Gene3D - 139 201 - -
Lal25g1203 276 PANTHER SAGA-ASSOCIATED FACTOR 29 4 275 - -
Lal25g1203 276 PANTHER UNCHARACTERIZED 4 275 IPR037802 GO:0000124
Lal25g1203 276 MobiDBLite consensus disorder prediction 102 118 - -
Lal25g1203 276 MobiDBLite consensus disorder prediction 91 118 - -
Lal25g1203 276 Gene3D - 202 275 - -
Lal25g1203 276 Coils Coil 16 36 - -
Lal25g1203 276 ProSiteProfiles SGF29 C-terminal domain profile. 131 276 IPR010750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1203 Lal-Chr25 15608795 15614912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1203 K11364 - gmx:100526864 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1203 25 15608795 15614912 Lal25g1203 25 15608795 15614912 ECH
Lal25g1203 25 15608795 15614912 Lal10g0100 10 1093010 1101314 LSH