Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1139 ATGGAAGAAATGGCGCTATACAGTTCTGCACCCATCGGTTCTCCGCCTCTAACATCAGAACAGGACCGTTCACTTCACAACGACGACGGTTACGATCTAAACGACGATGGCGTTTCTCTTGGTGTCGTTTCAATGGACGATGAGGGTTTCCCCTCACAACTCCCCTGCGATATCGAAGATGCTACAAATTACCGAAACGAAGAACGATCGGAAACAGTATCGGAAAAGAGCGGTTTCGCCGCCGATTTCTATAGTTGCGGAACCGATTTTTCCTCTCTGATGTTATTCCCTGAAGATCACAGACACAAGGATCTCGCGCCATATTTGGTATCTTCGGGGAAGAAGCTTAAACAGGCGAATCTGTTGGAGATTTGGGGTTTGGGAAGAAAATTTTCCGTTGAGTCCGTTTCTACTGTGTCTGTTCAATCTAAACCTAGTGAGAATGATGGATGTGAAAGGAAGATTGTGAGAACTGAGAATCGGGGTTCGATTCTGATTGATACGGGGAATGAGTTTGAGAAATCAAAACCTTATCGCAAGAGAAAGGATTCGAACTGCGATGGAAAAACTAGGATTACACGTGGCTGTCCCTTTTATAAGAAAATGCCAGGGACAAGCTTCACTGTTGATGCATTTCGGTATGGGTGTGTTGAAGGGTGCTCAGCATATTTTCTTAGCCACTTCCATTCTGATCATTATGATGGCCTTAGCAAGAAATGGTCAAATGGCCCTATTTATTGCTCTCCTCTAACAGCATGCCTAGTTCAAATGTGCTTTTCAGTAAATCCTTTGTATATCTGCCCTTTGGAATTTAACACGGAACATTTGATTGATGGTGTCAAAGTGACTTTGTTAGAAGCCAATCATTGCCCTGGTGCAGCTTTGATTCACTTTGACCTTCCAAATGGGCAATGCTATTTGCACACTGGGGACTTTAGAGCCTGTAAACAAATGCAAGCCTACCCTCTCCTTGTAAATCAACGTGTGAATATCCTTTACTTGGATACCACATATTGCAATCCGAAGTACAAGTTCCCTTCCAAGGAAGATGTACTAAACTATGTTGTAAAAATTACAAAGAACCACCTCAAAATAAATCCTAGAACTTTAGTGGTTGTTGGGGCATATAGTATTGGCAAAGAATGTGTTTATCTTGCAATTTCGAAGGCACTTGAGGTAAAAATTTATGCTAGTGCTTCAAGGAGGCGCATTTTGCTAGCCTATGATTGGCCTGTACTTTCAGATAATCTCTGTACAAATGGAAATGACACATTTCTCCATGTTTTGCCCATGTCATCTCTGAGAATTGAGTCCTTGAAGGATTATTTGAAGACCTACAAGGAACAATTCACATCAATATTGGCATTTCGTCCTACAGGTTGGACTTTCAATGAGAAAATGTGCACTGATCTGGAACTAATTAAACCTATTTCCAAAGGAAATATCACCATATATGGGGTTCCTTACAGTGAGCACTCCAGCTTCACGGAACTGCGAGATTTTGTTCAGTTTTTGAGGCCTGACAAGATAATTCCTACTGTTAGTGTCGGGAGTGCTGCTAATCGAGAAAAGATGCAATCATACTTCCGAGAGTGGTTGAAGGGCTAA 1608 0.4198 MEEMALYSSAPIGSPPLTSEQDRSLHNDDGYDLNDDGVSLGVVSMDDEGFPSQLPCDIEDATNYRNEERSETVSEKSGFAADFYSCGTDFSSLMLFPEDHRHKDLAPYLVSSGKKLKQANLLEIWGLGRKFSVESVSTVSVQSKPSENDGCERKIVRTENRGSILIDTGNEFEKSKPYRKRKDSNCDGKTRITRGCPFYKKMPGTSFTVDAFRYGCVEGCSAYFLSHFHSDHYDGLSKKWSNGPIYCSPLTACLVQMCFSVNPLYICPLEFNTEHLIDGVKVTLLEANHCPGAALIHFDLPNGQCYLHTGDFRACKQMQAYPLLVNQRVNILYLDTTYCNPKYKFPSKEDVLNYVVKITKNHLKINPRTLVVVGAYSIGKECVYLAISKALEVKIYASASRRRILLAYDWPVLSDNLCTNGNDTFLHVLPMSSLRIESLKDYLKTYKEQFTSILAFRPTGWTFNEKMCTDLELIKPISKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVSVGSAANREKMQSYFREWLKG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1139 535 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 97 534 - -
Lal25g1139 535 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 97 534 - -
Lal25g1139 535 MobiDBLite consensus disorder prediction 1 31 - -
Lal25g1139 535 Gene3D - 203 514 IPR036866 -
Lal25g1139 535 CDD SNM1A-1C-like_MBL-fold 188 341 - -
Lal25g1139 535 Gene3D - 344 492 - -
Lal25g1139 535 SUPERFAMILY Metallo-hydrolase/oxidoreductase 156 531 IPR036866 -
Lal25g1139 535 Pfam DNA repair metallo-beta-lactamase 413 517 IPR011084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1139 Lal-Chr25 14738508 14746421 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1139 K15340 - gmx:100790844 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1139 25 14738508 14746421 Lal25g1139 25 14738508 14746421 ECH