Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1086 ATGGCCACAACATCAATAAATATTTCTGCTACTTTTAATTCCAATTCTGCACAAGGTAAAAAATGCAAGTATATTGGTCAATCAGTGAGAGCAGTTCCGATTCGTATTGTATCCGTGGGGAAGAAGCGATCACAAGGATTGCAACTCATTGTTGATGACTATGTTGAAAAGCTCAAGTTTTATTGCGCTGTTGAGGATGTTCAAATTCGATCCAACCCTAGAAACGCGCGTGACCAAAGGGCTCAGGTTGATGACGAAGACTGTGTTATGATGAACCTTATCAGGTCTGATGATTGGGTTGTGATGTTGGATGAACATGGACAAGACATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCTGGAAATACTGTTATGAATGTGTCAATGACAGATTTGCCCATATGCAAAGATATTGTTTGCATGTTATTTGAATTGTTTGACGCAACGGTAGGGTTGTTGCTTAATGACCGTGAGGTTACAAATTCAAATATTGGAAACAACCTCTCCGCTTGCGAGGGTGCTTCAAGATTATCTTTCTGTATTGGAGGACCCTATGGTCATGGAAGAAAATTGCGGGAACGTGCTAACGTATCAATTAAGTTGTCTTCACTGGTCTTAAATCATCAAATAGCATTACTTGTGCTCATGGAACAACTTTACAGGTCATGGACAATTTTAAGGGGACAAAAGTACCATCATTAA 708 0.4011 MATTSINISATFNSNSAQGKKCKYIGQSVRAVPIRIVSVGKKRSQGLQLIVDDYVEKLKFYCAVEDVQIRSNPRNARDQRAQVDDEDCVMMNLIRSDDWVVMLDEHGQDIGSEQMAELVGDAGNTVMNVSMTDLPICKDIVCMLFELFDATVGLLLNDREVTNSNIGNNLSACEGASRLSFCIGGPYGHGRKLRERANVSIKLSSLVLNHQIALLVLMEQLYRSWTILRGQKYHH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1086 235 Pfam Predicted SPOUT methyltransferase 34 125 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 Pfam Predicted SPOUT methyltransferase 160 234 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 Gene3D - 31 132 IPR029026 -
Lal25g1086 235 Gene3D - 150 235 IPR029026 -
Lal25g1086 235 SUPERFAMILY alpha/beta knot 33 123 IPR029028 -
Lal25g1086 235 CDD RlmH-like 34 235 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 PANTHER METHYLTRANSFERASE 6 127 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 PANTHER METHYLTRANSFERASE 174 235 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 32 235 IPR003742 GO:0006364|GO:0008168
Lal25g1086 235 SUPERFAMILY alpha/beta knot 175 234 IPR029028 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1086 K00783 - gmx:100796609 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1086 25 14186736 14190836 Lal25g1086 25 14186736 14190836 ECH