Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1068 CCTAAACTCTTAAAGAATTTGAATGACCAAATGTGTCAAATATGTGGTGATAGCATTGGATTAGCTTCAACTGGTGATGTTTTTGTTGCTTGTAATCAATGTTCCTTCCCAATTTGTCGCCCTTGTTATGAATATGAACGAAAAGATGTGAATCAGTGTTGCCCCCAATGCAAGACTAGATACAAATGGCACAAAGGGAGTCCTCGAGTCGAGGGAGATGATGACGATGATGACAATGATGATAATGGCTATGAGATGATCAAGTTAAGGAAGCAATGGGAACAAGATTCGCAACAACCGATTCCACTTCTAATCGATAGGCAGCGGATATCTGGTGAGATTTCATGTGCTACATCTGATACTCGATCCGTTCGAACTACATCTGGTCCTTTGGGTTCATCGGAAAATGATCAATGTGTTGATTCAAATCAACCAGGTCCAGTAAGAATTGTAGACCCATCAAAGGACTTGAGTTCTTATGGCCTCAGAAATATTGAGTGGAAAGAAAGAATTGATAGCTGGAAACTGAAGCAGGAGAGAAATGTTATGCATAATCTTGGTAGATACAGTGAAGGGAAGGGAGACATTGAAGGCACCGGTTCCAATGGTGAAGAACTCCAAATGATTGACGATGCTCAACTACCTTTGAGTCGCGTGGTGCCTATTTCTTCGTCTAAGTTGACTCCTTATCGTGTAGTTATCGTACTCCGGTTGATTATTCTAGGTTTCTTCTTACAATATCGTATAACTCACCCTGTGAAAGATGCATATCCCCTATGGGCGACATCAGTTATTTGTGAGATTTGGTTTGCTTTATCATGGATCTTGGATCAGTTTCCGAAGTGGTCTCCAATTAATCGCGAGACATGCCTAAACAGGCTTGCTTTAAGATATGAACTTGAAGGAGAACCATCACAGTTGCTACCCATTGATGTTTTTGTGAGTACAGTGGATCCCCTTAAAGAGCCTCCTCTTGTTACTGCGAACACTGTTCTGTCTATACTTGCGGTCGATTACCCTGTCGACAAGGTTTCCTGCTATGTTTCAGATGACGGTTCAGCTATGTTGACCTTTGAAGCCGTTTCAGAAACAGCCGAGTTTGCAAAGAAGTGGGTGCCTTTTTGCAAAAGGTATAATATTGAGCCAAGAGCCCCTGAGTTTTACTTTGTCCAGAAGATTGATTACTTGAAGGACAAGATTCAACCTTCTTTTGTAAAGGAGCGCCGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTACGGGTCAATGCTCTTGTAGCCAAAGCTCAAAAGATTCCGGAAGAAGGCTGGACAATGCAGGATGGAACTCCTTGGCCGGGAAATAGTCATAGGGATCATCCTGGAATGATTCAGGTGTTTCTTGGTCATAGTGGAGGGCTTGACGTGGATGGAAATGAGCTACCTAGACTTGTTTATGTTTCTCGTGAAAAGCGACCGGGTTTCCAACATCACAAGAAAGCTGGAGCTATGAATGCTTTGATTCGAGTATCGGCTGTTTTGACAAACGGAGCATATATTTTGAATGTTGATTGTGACCACTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGGAAAAAAACATGCTATGTGCAATTCCCTCAGCGGTTCGATGGCATTGACTTTCACGATCGATATGCAAATCGCAACATCGTGTTCTTCGACATCAATTTGAAAGGTCTGGATGGTATTCAGGGTCCAGTCTATGTGGGAACTGGTTGTTGTTTCAATAGGAATGCTCTATATGGTTATGATCCTGTTTTGACTGAGGAAGATTTGGAGCCTAACATTATTGTGAAGAGTTGTCGGGGTTCTAGAAAGAAGGGTAGGGGTAGGAATAAGAAGTACATCGACAATAACAGGACTTCTAAAAGAACTGAATCGAACGTTTCAATCATTAGTAGGGAAGACACAGAAGAAGGTGTTGAAGAGTACGATGATGAAAGGTCACTTCTTATGTCTGAAGAGAGTTTGGAGAAGCGTTTCGGTCATTCACCGGTTTTAATAGCTGCTACGTTCATGGATCAAGGTGGCATTCCTCCTTCTACCAATCCTTCAGCTCTTCTGAAGGAAGCAATCCATGTTATCAGCTGTGCTTATGAAGACAAGACCGAATGGGGCAAAGAGATTGGATGGATATACGGTTCTGTCACCGAAGATATCTTGACCGGGTTTAAAATGCATACTCGTGGTTGGATTTCCATCTATTGCATGCCATCTCGGCCAGCTTTTAAGGGTTCTGCTCCCATCAATCTTTCCGATCGTCTCAACCAAGTGCTTCGATGGGCATTGGGTTCAATTGAGATCTTTCTAAGCAGGCATTGTCCCTTGTGGTATGGCTACAATGGAAGATTGAAGCCTCTGCAAAGGCTAGCTTATATTAACACTATAGTCTACCCTCTTACCTCAATCCCGCTTATCGCTTATTGTACACTTCCTGCCTTTTGTCTCATCACAAATAGGTTTATTATTCCTGAGATAAGCAACTTTGCTAGCATGTGGTTCATTCTACTCTTCACCTCTATTATAGGCACTTCACTTCTTGAGCTTTGGTGGAGTGGTGTTAGTTTAGAAAATTGGTGGAGGAATGAACAGTTTTGGGTTATTGGTGGTACATCTGCTCATCTTTTTGCTGTATTCCAAGGCTTTCTAAAAGTACTTGCTGGGATTGACACAAACTTTACTGTGACATCGAAGGCATCGGACGAAGAAGGAGATTTTTCGGAACTGTATGTATTCAAATGGACATCACTTCTCATCCCTCCTACAACAGTGCTTATTGTGAATTTGGTAGGCATTGTGGCTGGTGTGTCAATTGCTATAAACACTGGTTACCAATCTTGGGGTCCATTATTTGGTAAGCTGTTTTTTGCTATATGGGTCATTTCACATTTATATCCTTTCTTGAAGGGTCTATTAGGTAGGCAAAATAGGACACCAACCATTGTTATTGTTTGGTCCTCACTCTTTGCTTCCATATTCTCCTTGCTATGGGTGAGGATTGATCCTTTCATCAATGGTTCCTCAAAAGCTTCTCATGGTCAATGTGGCATCAACTGTTAG 3111 0.4182 PKLLKNLNDQMCQICGDSIGLASTGDVFVACNQCSFPICRPCYEYERKDVNQCCPQCKTRYKWHKGSPRVEGDDDDDDNDDNGYEMIKLRKQWEQDSQQPIPLLIDRQRISGEISCATSDTRSVRTTSGPLGSSENDQCVDSNQPGPVRIVDPSKDLSSYGLRNIEWKERIDSWKLKQERNVMHNLGRYSEGKGDIEGTGSNGEELQMIDDAQLPLSRVVPISSSKLTPYRVVIVLRLIILGFFLQYRITHPVKDAYPLWATSVICEIWFALSWILDQFPKWSPINRETCLNRLALRYELEGEPSQLLPIDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEAVSETAEFAKKWVPFCKRYNIEPRAPEFYFVQKIDYLKDKIQPSFVKERRAMKREYEEFKVRVNALVAKAQKIPEEGWTMQDGTPWPGNSHRDHPGMIQVFLGHSGGLDVDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYILNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDFHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRNALYGYDPVLTEEDLEPNIIVKSCRGSRKKGRGRNKKYIDNNRTSKRTESNVSIISREDTEEGVEEYDDERSLLMSEESLEKRFGHSPVLIAATFMDQGGIPPSTNPSALLKEAIHVISCAYEDKTEWGKEIGWIYGSVTEDILTGFKMHTRGWISIYCMPSRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLQRLAYINTIVYPLTSIPLIAYCTLPAFCLITNRFIIPEISNFASMWFILLFTSIIGTSLLELWWSGVSLENWWRNEQFWVIGGTSAHLFAVFQGFLKVLAGIDTNFTVTSKASDEEGDFSELYVFKWTSLLIPPTTVLIVNLVGIVAGVSIAINTGYQSWGPLFGKLFFAIWVISHLYPFLKGLLGRQNRTPTIVIVWSSLFASIFSLLWVRIDPFINGSSKASHGQCGINC 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1068 1036 Pfam Cellulose synthase 310 1026 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal25g1068 1036 SUPERFAMILY RING/U-box 4 81 - -
Lal25g1068 1036 MobiDBLite consensus disorder prediction 620 639 - -
Lal25g1068 1036 PANTHER CELLULOSE SYNTHASE 3 1036 - -
Lal25g1068 1036 CDD mRING-HC-C4C4_CesA_plant 10 60 - -
Lal25g1068 1036 MobiDBLite consensus disorder prediction 64 83 - -
Lal25g1068 1036 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 469 610 IPR029044 -
Lal25g1068 1036 MobiDBLite consensus disorder prediction 116 143 - -
Lal25g1068 1036 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 1036 - -
Lal25g1068 1036 Pfam Zinc-binding RING-finger 3 78 IPR027934 -
Lal25g1068 1036 MobiDBLite consensus disorder prediction 116 153 - -
Lal25g1068 1036 Coils Coil 408 428 - -
Lal25g1068 1036 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Lal25g1068 1036 SUPERFAMILY Nucleotide-diphospho-sugar transferases 328 610 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1068 Lal-Chr25 13949056 13954455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1068 2 1034 Glycosyltransferase AT4G32410 79.032 0.0 1711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1068 K10999 - gmx:100810567 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1068 25 13949056 13954455 Lal25g1068 25 13949056 13954455 ECH