Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1067 ATGGGAACAAAATTCCGCCACCTCTTTCTTCCTCTTCGTTCTTATTCCATTCTTTCTAACCCTCTTGGTTCATCTTCTTCACGGCCACTTGTGAAGTACAAAAGTCTAGTTAAAGAAGGGAAGTTGCAGCATGATCCTTTCCAAGAAGGTGTTGCTTTACAACTTGAGAACCTGCTTCAAAGGTTGGATCAGTATGACAAACAAATGGAACAATATCATGTAAATCTATCAAATTGGGAGAAGAATCGAGAGAATGAGTGGCGAAGACTTCTCACGGAGGAAGCTGAGCTGCAGCAGAATGAAGAGGATTGGTGGAAGAGATTGAACAGTAAACTTTCTGATAGATGGGTCTCTCGTAAAAGACCGAAAAATATGGAAGCAGGGGTAGGGCAATGGGTTTCATATCTTAAGCGTGAGAAGAAGTTGGATTCAGCAGTTGGTCAACGTCCAATTGCTCCTACATCCCCAAAAGGACTTTACATATATGGCAATGTTGGCAGTGGGAAAACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATTGTTAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTGAGAATAAATGAACATATGCACAAAATATGGAAGAATCAAGTGGAAGAGAAGCCTTTGAAATCAAGCATTTCGGGTTGGATTATGAATCTACCCTTTGACACAAAAGCTAAGGAGTGGCTGGCTGCAGAAGAAAGATACAACCAAGAGGTAAAGATGAAAAACATTCTTCTCGCTGTAGCAGATAAGTTTTTTCTGGATCAAGAAGAGGATGAAAAGGGAGCTAGCATTTTGTGCTTTGACGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTCAGCAGATTGTTGAATAGTGGAACTATTATTGTGGCTACCAGTAATCGAGCGCCAGAGGACTTAAACGAGGCTGGTATGCAACGAGAAATCTTCCAAAAACTTGTCTGCAAATTGGAGGAACATTGTGAGAATGTATTGATAGGAAGTGAAATTGACTACCGTCGTTTTATAGCACAAAAATCAGCGAACCAGATAGAAGGAGAAAATAATCGGTCGCCTGGGATTGGTAGCTATTTCTGGCCTATTGAGATGGAATCAATCAATAAATTTGAGGAAAAGTGGCATGATGTAACTAGCAGATTAGGAGGAAGAATAATCTCCAACACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCTGAAAGTTGTGAAGGAGTTGCACGCTTCACATTTGAGCATCTCTGTGGTCGCCCGTTGGGTGCAGCAGATTATATTGCTGTAGCTGAAAACTATCACACTGTTTTCATATCTGATATTCCAATGATGAGTATGCGCATCCGTGACAAGGCACGGAGGTTTATCACCCTTATTGATGAGTTATACAATCGTCATTGCTGCCTATGTTGCTTGGCATCCTCTTCAATTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTTGAAACAGAGACCGAAGGTGCGAAACTTCGTCGCGATGTCTTAGCAGAAGGCAATGTAGGCTCAGGAGGTGGCCCTGTTGGTATCACATCCATTCTATCTGGTCAAGAAGAGATGTTTGCTTTTCAAAGAGCTGTATCACGCCTGATTGAAATGCAAACACCATTATACTTGGATGGAGTCAGTAATTTCCACCCTTATTTTCAGAGGCAACAAAAAAACTTCCAAAAAAACAATGACAAATTACTATCAGAGTTATCAATCTGA 1794 0.4103 MGTKFRHLFLPLRSYSILSNPLGSSSSRPLVKYKSLVKEGKLQHDPFQEGVALQLENLLQRLDQYDKQMEQYHVNLSNWEKNRENEWRRLLTEEAELQQNEEDWWKRLNSKLSDRWVSRKRPKNMEAGVGQWVSYLKREKKLDSAVGQRPIAPTSPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKNQVEEKPLKSSISGWIMNLPFDTKAKEWLAAEERYNQEVKMKNILLAVADKFFLDQEEDEKGASILCFDEIQTVDVFAIVALSGILSRLLNSGTIIVATSNRAPEDLNEAGMQREIFQKLVCKLEEHCENVLIGSEIDYRRFIAQKSANQIEGENNRSPGIGSYFWPIEMESINKFEEKWHDVTSRLGGRIISNTISVMFGRTLEVPESCEGVARFTFEHLCGRPLGAADYIAVAENYHTVFISDIPMMSMRIRDKARRFITLIDELYNRHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETETEGAKLRRDVLAEGNVGSGGGPVGITSILSGQEEMFAFQRAVSRLIEMQTPLYLDGVSNFHPYFQRQQKNFQKNNDKLLSELSI 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1067 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 328 IPR027417 -
Lal25g1067 597 Gene3D - 145 349 IPR027417 -
Lal25g1067 597 SMART AAA_5 155 334 IPR003593 -
Lal25g1067 597 Coils Coil 48 82 - -
Lal25g1067 597 PANTHER ATPASE N2B 24 588 IPR005654 GO:0005524|GO:0016887
Lal25g1067 597 Pfam AFG1-like ATPase 143 498 IPR005654 GO:0005524|GO:0016887
Lal25g1067 597 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 24 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1067 Lal-Chr25 13940616 13948137 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1067 - - mtr:MTR_1g012370 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1067 25 13940616 13948137 Lal25g1067 25 13940616 13948137 ECH