Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1028 ATGAAGTTTATGAAGTTGGGTTCCAAACCTGATGCATTTCAAGCTCATCATGGAAACTCTCTCAGGTATGTGTCATCTGAATTGGCTACAGATATTGTCATAACGGTTGGTGATGTTAAGTTTTACCTTCACAAGTTTCCTTTACTTGCCAAGAGCAATAGATTGCATAAGTTGGTATCAAAGGCTAATGAAGAGAATTGTGATGAAATTTTGTTGGATGATTTCCCTGGAGGGTCCAAGGCCTTTGAAATATGTGCAAAATTCTGCTATGGAATGACTGTTACTCTCAATGCTTATAATGTTGTGGCTGCTCGTTGTGCAGCCGAGTATCTTGAGATGAACAAAGATATTGATAAAGGAAACTTAATCTTTAAAATTGATGTGTTCCTTAACTCGAGTATCTTTCGAAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTTTGCCATGGTCGGAGGATTTGAAGATTGTTGGGAGATGCATAGATTCAATAGCTACTAAAACTTCTGTGGACCCAGAAAACATCACTTGGTCTTACACTTATAACCGGAAATTGACTGAGCCTACTGATAAGATTGTTGAATTATCTCAAGAGAAAATTGAGCCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTTGACATTGATCTTTATAAACGGATAATGATCACTGTGAAATCGAAGGGAAGAATGGATGATGTTGTGATTGGTGAAGCGCTGAAAACATATGCAGTAAGATGGTTGCCTAATTCTATTGATGCGTTGGTTTCTGATGCGCATGTGTGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTTTATTGCCATGTGATAATGACAACACGGTTTGTTCGTGTAGTTTCTTGTTGAAGCTATTGAAAGTGGCCATATTAGTCGAAGCTGACGAGTCTTCGAGTGAGTTATTGATGAAGAGCATTAGCTTAAAGTTGCACGAAGCTTGTGCCAAAGATTTACTGATTCCAGCAAGGTCTCCACAGATTACGACATATGACATTGATCTGGTACAATGCCTTTTGAACCGATACATGTCAAATGAAATGGAAAGTGGTGTTAAAGTAAGTGGTGAATCTATTTTAGCTCATCGCACTTTATTGAATCTTGGCAAGCTTGTAGATGACTATCTTAGGGAAATTGCACATGATCCAAATCTTGGTCTCGCTAGTTTTGTTGGTTTGTCACAGTCAATTCCAGAATTTGCTAGACCAAATCATGATAGTCTCTACCGAGCCGTTGATCTCTACTTGGAGGGGCACCCAACTTTGACAAAAGCTGAAAAGAAGAAGATATGTGGACTGATTGATGTGAAGAAATTGACAATGGATACATCAATGCATGCTGCTCAAAATGAACGCCTTCCTCTTCGAGTGGTAGTGCAGGTTCTGTTTTTTGAACAAGTAAGAGCTTCTGCTGCCAACGCTCGAGCACTTAGTTACAATCGGCGTGATTCTTCTTCACACATTGTGATGAATGGAGACGAAGAATACAACAACCGGATTAGCCAATTGAAGGTTAAAGATGAAGAGTTACAAAATAAGAATGGGAAATTGAATAAGAAGAATAGCAAAAACAGCAGAAGTGGCATGCAATTGTTGCCTTCAAGGTCAAGGAGAATATTTGACAAGTTATGGAGTGTTGGTAAGGGACAACAAGGAGAGAATAGGAGCTCAGAAACTTCAGGGAGTTCTAATAGCCCAACAACTTCTGTAGTGATTGGAGATACAAAATCATGTGGCTCATCTTTGAGACACAGAAGGTATTCTGTTTCTTAA 1809 0.3897 MKFMKLGSKPDAFQAHHGNSLRYVSSELATDIVITVGDVKFYLHKFPLLAKSNRLHKLVSKANEENCDEILLDDFPGGSKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMNKDIDKGNLIFKIDVFLNSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIATKTSVDPENITWSYTYNRKLTEPTDKIVELSQEKIEPVPKDWWVEDICELDIDLYKRIMITVKSKGRMDDVVIGEALKTYAVRWLPNSIDALVSDAHVWRNKSLVETIVCLLPCDNDNTVCSCSFLLKLLKVAILVEADESSSELLMKSISLKLHEACAKDLLIPARSPQITTYDIDLVQCLLNRYMSNEMESGVKVSGESILAHRTLLNLGKLVDDYLREIAHDPNLGLASFVGLSQSIPEFARPNHDSLYRAVDLYLEGHPTLTKAEKKKICGLIDVKKLTMDTSMHAAQNERLPLRVVVQVLFFEQVRASAANARALSYNRRDSSSHIVMNGDEEYNNRISQLKVKDEELQNKNGKLNKKNSKNSRSGMQLLPSRSRRIFDKLWSVGKGQQGENRSSETSGSSNSPTTSVVIGDTKSCGSSLRHRRYSVS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1028 602 SMART BTB_4 30 128 IPR000210 GO:0005515
Lal25g1028 602 SUPERFAMILY POZ domain 18 114 IPR011333 -
Lal25g1028 602 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 4 587 IPR029961 GO:0060918|GO:0099402
Lal25g1028 602 CDD BTB_POZ_NPY3-like 22 125 - -
Lal25g1028 602 MobiDBLite consensus disorder prediction 561 602 - -
Lal25g1028 602 Gene3D Potassium Channel Kv1.1; Chain A 12 119 IPR011333 -
Lal25g1028 602 Coils Coil 505 532 - -
Lal25g1028 602 ProSiteProfiles NPH3 domain profile. 210 480 IPR027356 -
Lal25g1028 602 MobiDBLite consensus disorder prediction 557 602 - -
Lal25g1028 602 Pfam NPH3 family 210 455 IPR027356 -
Lal25g1028 602 PANTHER OS12G0117600 PROTEIN 4 587 IPR043454 -
Lal25g1028 602 MobiDBLite consensus disorder prediction 520 544 - -
Lal25g1028 602 MobiDBLite consensus disorder prediction 529 544 - -
Lal25g1028 602 Pfam BTB/POZ domain 26 118 IPR000210 GO:0005515
Lal25g1028 602 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1028 Lal-Chr25 13580798 13586087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1028 23 504 EF-hand Containing Proteins AT3G44820 32.370 2.70e-88 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1028 - - gmx:100809437 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1028 25 13580798 13586087 Lal25g1028 25 13580798 13586087 ECH