Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0771 ATGGCTTCCGATGCTGATATGGAGGACTACGGGTATAAAGAGATGATGGAAGCCTATAGGGAGATGTTGACTTATATTAAGTCAGCGGTGACGCGCAACTATAGTGAAAAGTGCATAAACAGCATCATGGACTACGTCTCGGGTTCAGCTAGCCAGAACTTTTCCCTTCTGCAGGAATTCTACCAGACAACTCTGAGTGCTCTTGAAGAAGCAAAGAATGAGAGATTGTGGTTTAAGACAAATCTGAAGCTGTGTAAGATATTCTTTGATATTGGTGAATATGGACGGATGAATAAGATCCTGAAGGAACTTCACAAATCTTGTCAAAGAGAAGATGGCACAGATGACCATAAGAAAGGAACCCAACTTTTGGAGGTTTATGCTATAGAAATTCAAATGTACACTGAAACCAAGAACAACAAAAAACTCAAGCAACTTTACCAGAAGGCACTCACTATTAAGTCAGCCATTCCCCATCCAAGGATAATGGGAATAATCCATGAATGTGGTGGGAAAATGCATATGGCTGAGCGCCAGTGGGCGGAAGCAGCTACTGATTTCTTTGATGCTTTTAAGAATTATGACGAAGCTGGGAATCAGAGGCGTATCCAATGCTTGAAGTACCTTGTTCTTGCCAACATTTTGATGGAGTCTGAAGTAAATCCATTTGATGGGCAGGAGGCTAAGCCATACAAGAATGACCCAGAAATTTTGGCTATGACAAACTTGATAGCAGCTTATCAACGCAATGAAATATTGGAATTTGAGAAAATCCTGAAGAGTAACAGAAGAACCATCATGGATGATCCATTTATCAGAAATTACATTGAGGATCTTCTGAAGAATATCAGAACACAAGTCTTGCTGAAGCTCATCAAACCATATACAAGGATTAGGATCCCATTTATATCTAAGGAACTTAATGTACCTGAGAATGATGTTGAGCAGCTACTGGTGTCACTTATTTTGGATAACAGAATCCAAGGATACATCGATCAAGTGAATCGGCTTTTGGAACGCTCTGATAGGTCGAAGGGAATGAAAAAGTACAGTGCTGTGGACAAATGGAATGCACAGCTTAAGTCTCTTAATCAAACTATCACCAACAGAGTTGGTTAA 1119 0.4013 MASDADMEDYGYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFSLLQEFYQTTLSALEEAKNERLWFKTNLKLCKIFFDIGEYGRMNKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFDAFKNYDEAGNQRRIQCLKYLVLANILMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISKELNVPENDVEQLLVSLILDNRIQGYIDQVNRLLERSDRSKGMKKYSAVDKWNAQLKSLNQTITNRVG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0771 372 ProSiteProfiles PCI domain profile. 176 345 IPR000717 -
Lal25g0771 372 Pfam PCI domain 239 339 IPR000717 -
Lal25g0771 372 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 12 371 - -
Lal25g0771 372 PANTHER - 12 371 - -
Lal25g0771 372 Gene3D - 5 372 - -
Lal25g0771 372 SUPERFAMILY "Winged helix" DNA-binding domain 268 345 IPR036390 -
Lal25g0771 372 SMART PINT_4 274 356 IPR000717 -
Lal25g0771 372 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 274 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0771 Lal-Chr25 6614498 6621058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0771 K12176 - gmx:100788070 692.575