Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0562 ATGCTTGAAACAATGGAAAGTTCAGTGAACGGTGGTTGTGGTGGTGGATTTTCACAGGCACAGTTTAATAGCTGTGGTGATAGTAGTGAAGAAGAACTTTCTGTGTTGCCACGTCATACTAAAGTGGTTGTCACCGGAAACAACCGCACCAAATCGGTTCTCGTTGGTCTTCAAGGTGTGGTTAAGAAAGCCGTTGGACTCGGTGGATGGCATTGGCTGGTTCTTACCAATGGTATTGAAGTTAAACTGCAGAGGAATGCTCTTAGCGTGATTGAACCACCCACTGGGAATGAGGAAGATGATGACCTTGAATTTGAAAATGTGCCTTGGAATGGATCAGATATGGCATGGGATGACACTCAAAAGCCCCACAAATCGAGGCCCAGAATACATAGATCATTAGGATCATCTCAAAGGACTTTGAGCAGGTCCTTCTCTGCTGATTCACAATCAAAGGGGTCCATAACTATGCCTCATGGGTGGACGAAGGTTGACTTGAGCAAATTAGAGATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTGGTGGATGCTGTCCCAAACCCGTCAAAAGAGCAGTTAGTAGATGTTGTTCAGAGGCATTTCATGTCTCAGCAAATGGACGAGTTGCAGGTGATTATGGGATTTGTTCAAGCTGTAAAGAGGCATAAGACTATGTGCAAATGA 690 0.4478 MLETMESSVNGGCGGGFSQAQFNSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEPPTGNEEDDDLEFENVPWNGSDMAWDDTQKPHKSRPRIHRSLGSSQRTLSRSFSADSQSKGSITMPHGWTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAVKRHKTMCK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0562 229 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 229 - -
Lal25g0562 229 PANTHER SAP30 1 229 IPR024145 -
Lal25g0562 229 MobiDBLite consensus disorder prediction 113 154 - -
Lal25g0562 229 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 169 222 IPR025718 GO:0005515
Lal25g0562 229 Gene3D - 144 229 IPR038291 -
Lal25g0562 229 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0562 Lal-Chr25 4123351 4126397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0562 - - gmx:100809195 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0562 25 4123351 4126397 Lal25g0562 25 4123351 4126397 ECH