Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0560 ATGCAATTGCTATCGCAACCGCAATTTAAAACAGTGGTTCATAGATCTATTGTGCAAGGCCTTAAACTGAAACATAAATTCTTGATGCATATTGCTCATCTCTCAGATCAACTCACACCAATTGTTTCATCAGAGTGTGAATCAACGGAACGGATTAATGCGTTGAAATCAGATGTTCAGTCAGTCAAGGAGAAGAATTATGAACTCAAGAGGAAAGTAAGAAATCTAATGGAGAAATTGCTGCAGGCTGAACAAGGAAAGGGTCATGCACAGGAACAGGTTGTTAAGAAGCAGAAGGTTGGGCCATTTGGCACTGTCAAGGGTCTCAGAAAGAACCCAACTGTTGTTCCTGATGAATCTGTGAATCCCAGATTGGCGAAAATCTTGGAAAAAGTTGCCATTAATAAAGAAATTATAGTTGTACTGGCAAACGAAAATGTGATGGAGATGTTGAAGGTTTGGTTCACCAACATCAAGAGGGTTGGCATACCAAATTATTTAGTGGTTGCCTTAGATGATAAAATTGATGAATTCTGCAAATCAAATGATGTTCCGGTTTATAGAAGAGATCCAGATGCAAGTGTTGATAAAATTGCTAAGACAGGTGGTAACCATGATGTCTCAGGATTGAAATTTCGCGTTCTGAGAGAATTTCTGCAACTGGGTTACGGTGTTCTTTCCTCAGATGTTGATATTGTATACTTGCAGAACCCATTTGACCATCTTTATAGAGATTCAGATGTGGAGTCAATGTCTGATGGTCACGATTATGAGACAGCTTATGGGTTTGATGAAAGCTTTGATGAACCCGAAATGGGTTGGTCTCGATATGCTCTTACAATAAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCTACTCTTCCTTCAACTGAGCTCTTGGATCGTGTTGCTACTCGGCTTTCTTCAAACCCAAACTCTTTTTCCCTTCCCACCCTGGTTATGATGGACTTCATGCTTCCAAAAGAACAATGGATATTTCATATTCAACTTCAAACACCTGTTCATCCGCCATCATCCTTCTCAAAACTACCCACTGTTTTTCGTCAGAAGCCCCACCACCATGAACATAGCCTCTTCACTTCATTACCACCCTTCGTCATTGCACACCAGATTCGCCATCACCTCCACACAAACTTCGCTATTGCCCTTCATCATCTCACCAAATTCGGCATCACTGCTCGACCACATTGA 1221 0.407 MQLLSQPQFKTVVHRSIVQGLKLKHKFLMHIAHLSDQLTPIVSSECESTERINALKSDVQSVKEKNYELKRKVRNLMEKLLQAEQGKGHAQEQVVKKQKVGPFGTVKGLRKNPTVVPDESVNPRLAKILEKVAINKEIIVVLANENVMEMLKVWFTNIKRVGIPNYLVVALDDKIDEFCKSNDVPVYRRDPDASVDKIAKTGGNHDVSGLKFRVLREFLQLGYGVLSSDVDIVYLQNPFDHLYRDSDVESMSDGHDYETAYGFDESFDEPEMGWSRYALTIRIWVYNSGFFYIRPTLPSTELLDRVATRLSSNPNSFSLPTLVMMDFMLPKEQWIFHIQLQTPVHPPSSFSKLPTVFRQKPHHHEHSLFTSLPPFVIAHQIRHHLHTNFAIALHHLTKFGITARPH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0560 406 Pfam Nucleotide-diphospho-sugar transferase 163 376 IPR005069 -
Lal25g0560 406 Coils Coil 52 79 - -
Lal25g0560 406 PANTHER GLYCOSYLTRANSFERASE 36 313 - -
Lal25g0560 406 PANTHER ARABINOSYLTRANSFERASE RRA3 36 313 IPR044290 GO:0016757|GO:0080147
Lal25g0560 406 SUPERFAMILY Nucleotide-diphospho-sugar transferases 138 303 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0560 Lal-Chr25 4101773 4104082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0560 K20783 - gmx:100804935 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0560 25 4101773 4104082 Lal25g0560 25 4101773 4104082 ECH