Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0518 ATGACACTTCCAAATGCTGCTCCATTCATCACTTCACCTTCTGTTTATTGCGTTGCTCGCTTCAGTTATCATCTTCCATCTTCAGGTGCTGGGAATTCTGGGTTTTGTGTTGGGTCCCATGCTGTGAAAAGTGATGTTTTGATAGAAAGAAGAAGGTTGAAGCCACTGAACACTCACACTGTAGAAAATAATAATAATAATAACAATAATCTCATCAAACCCACTTTTGAAATTCCAGTTTCTTGCTTCCAGCTTATTGGTGTTCCTGACCAAGCAGAGAAAGATGAAATTGTTAAGGCAGTGATGGGTTTGAAAAATGCAGAAATTGAAGAAGGTTACACCATGGATGTTGTTGCATCTCGTCAGGATCTTCTGATGGATGTTAGGGATAAGCTTCTTTTTGAGACAGAATATGCTGGTGACCTGAGGGAAAATATTCCCCCGAAATCTTCTCTTCATATTCCTTGGTCTTGGGTGCCTGGTGCTCTTTGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTGGACATTGGTCGGGAAAGCCTTCAGCATCAAGATGCTAAGCCATATGCAGATGATTCGCTTCTTGCTATGGCACTAGCCGAGTGTGCAATTGCGAAGATTGGCTTTGAGAAGAAGAAAGTGTCTCATGGTTTTGAAGCTCTTGCTCGTGCCCAGTGTATCCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTGCTATCTCAAATTGAAGAATCTCTTGAAGAACTTGCACCTGCTTGCACCTTGGAACTACTTAGCATGTCACACATCCCTGAAAATGTTGATAAAAGACGAGGAGCAATTGCAGCTTTGCGTGAATTGCTTAGACAGGGTCTTGACGTTGAAGCTTCTTGCCAAGTTCAGGACTGGCCTTCCTTTCTAAGCCAAGCATTTGACAATTTGCTGGCTAATGAGATAGTAGATCTTCTTCCTTGGGATAACTTAGCTGTGATGCGAAAGAATAAGAAGACAATTGAATCGCAGAATGTAAGAGTAGTGATTGATGCAAACTGTTTCTATAGAGTTTTTGCAGCTCATATGGCAATTGGGTTTTCTAGCAAACAAGAAGAGTTGATTAACAAAGCAAAAAGCATATGTGAATGTTTGATAGCATCAGAGCGCATCGATCTGAAATTTGAGGAAGCTTTTTGCTTATTCCTTCTCGGGAAGGGCACAGAGACTGAGGTGGTTGAAGAGCTTAAGCACCTTCAGCTGAACTTAAACCCAAAACATAATTCAGTCTTCGGGAAGACAATAATAGATGCTTCTGCTGCAAACCCATCATTGAATATTGAATTTGTGATTTCTGATCTCAGAAAACTTGCTGAACTTGACCAGGAATTGTGGCTGAAGGATTCTGTGCTCGCTTTATTTCCAGATACTAAAGATTGTTCTCCAGCTTTGGCCAATTTCTTCAATGCTCGAAAGAAATTTTCTGGAAGCAAGGAAACTAACGGAGCTGCAAAGTCATTGCCTTCTGTATGTCATAGACCTCTATCCTCATATGGTTCCTTAGACCGAAGAGAGATTGAGGAACCTCGCTCTTACATGAGCTCTTCGCCAAATATAGGGTTTTATGTCAAGCAGATGGCTCATACTGATTTGCAGAGTTCACTGCTATCTGGCAGAAATGAAGAAGCTAACAATCTGAGCGAGTCACCTGTTCAAGTGAAAAGGAGCCTTGGCACTCAGCGCAATGGGATCTGGGGTAGCCACTTCATTCATGCACACATATTTGGAAAAATAACATACATTAGCGTGCTGGGTTGTATGGTGTTTGCTACAATGAAGTTAATGGGAATCAACTTCAGCAGGACTCTTAATGCTTCTCATGGGGCTTTGACCAAAGCCTATGATTATATTGCCTGGAATGCAGATTCTTCTGGTGATTACTCTGTTGGCCCTGCTTATATTAGGGGGGAAAACATTGCTGACAGACTGAAGAAGATCTTGTCAATGGTCAAGATGCCATTTTTGCACAAGTCGGGTGCTGGAAAGCATAGTGATTTACATGCTTCTCTTATGTCATCGTCGTCCCCTATCAATGCTTACAGGAGGCTGATGCCTGTGGAAGAAGCTGAGACCCTTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTCTGGGGCCGAGTCATGAAGTTAATTGCCTAGCTGAAATGCTTGATGAATCCATGCTTGCCCAGTGGCAAGCTTTGGCTGATGCTGCAAAAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTAAACTTATCTGTCATTCAAGCTAACATTCTATTAGATGGGAATGGAGTAGACATAGCAGAAATAGAAGCTCTCTTAGAGGAAGCAGCTGAACTTGTTGATGATTCTCAGAAAAAGAACCCAAACTACTATAGCACTTACAGAGTAAAGTATATCCTGAAGAGGGGAGAAGATGGTTCATGGAAGTTCTGTGAAAGTGATATAAGAACACCATCATATTTTATGCCTACTCTTATACCGAGCTGTTGCAGCTAA 2523 0.417 MTLPNAAPFITSPSVYCVARFSYHLPSSGAGNSGFCVGSHAVKSDVLIERRRLKPLNTHTVENNNNNNNNLIKPTFEIPVSCFQLIGVPDQAEKDEIVKAVMGLKNAEIEEGYTMDVVASRQDLLMDVRDKLLFETEYAGDLRENIPPKSSLHIPWSWVPGALCLLQEVGESKLVLDIGRESLQHQDAKPYADDSLLAMALAECAIAKIGFEKKKVSHGFEALARAQCILRSKPSLAKMTLLSQIEESLEELAPACTLELLSMSHIPENVDKRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQAFDNLLANEIVDLLPWDNLAVMRKNKKTIESQNVRVVIDANCFYRVFAAHMAIGFSSKQEELINKAKSICECLIASERIDLKFEEAFCLFLLGKGTETEVVEELKHLQLNLNPKHNSVFGKTIIDASAANPSLNIEFVISDLRKLAELDQELWLKDSVLALFPDTKDCSPALANFFNARKKFSGSKETNGAAKSLPSVCHRPLSSYGSLDRREIEEPRSYMSSSPNIGFYVKQMAHTDLQSSLLSGRNEEANNLSESPVQVKRSLGTQRNGIWGSHFIHAHIFGKITYISVLGCMVFATMKLMGINFSRTLNASHGALTKAYDYIAWNADSSGDYSVGPAYIRGENIADRLKKILSMVKMPFLHKSGAGKHSDLHASLMSSSSPINAYRRLMPVEEAETLVRQWQTIKAEALGPSHEVNCLAEMLDESMLAQWQALADAAKEKSCHWRFLLLNLSVIQANILLDGNGVDIAEIEALLEEAAELVDDSQKKNPNYYSTYRVKYILKRGEDGSWKFCESDIRTPSYFMPTLIPSCCS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0518 840 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 44 824 IPR044685 -
Lal25g0518 840 Pfam ARC6-like, IMS domain 702 819 IPR025344 -
Lal25g0518 840 Coils Coil 775 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0518 Lal-Chr25 3695011 3702960 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0518 - - gmx:100801086 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0518 25 3695011 3702960 Lal25g0518 25 3695011 3702960 ECH
Lal25g0518 25 3695011 3702960 Lal10g0909 10 16521205 16532692 LSH