Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0517 ATGGTTCTCGATCTACTCACCAAAACCCTAAAACTCAAAACAAAACAACAAGAATTTCTCATTCGCGTCACCATTCTCACGCTCGTCTACATTCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTACGCTATGAATCCATGATCCACGAGTTCGATCCTTACTTCAATTACCGAACTACACTCTACCTCACTCGGAATGGATTCTACGATTTCTGGAACTGGTTCGATTCCGATAGCTGGTATCCTCTCGGTAGAATCATCGGTGGAACACTGTATCCTGGTCTTATGGTAACCGCTGCTCTCATCTATCGAATCCTTCATTTTCTACGATTCGTTGTTCATATACGTGAGGTTTGTGTCCTTACGGCGCCGTTTTTCGCATCCAATACTACAATTGTTGCGTACTTGTTCGGTAAGGAACTTTGGGACTCTGGTGCTGGTCTTGTTGCTGCGGCATTGATCGCGATTTGCCCTGGCTACATTTCTAGGTCTGTTGCTGGATCCTATGATAATGAAGCTGTTGCAATTTTCGCGCTGTTGTTGACCTTTTACTTGTTCGTCAAGGCAGTGAACACAGGATCACTGGCATGGTCGTTGGCATCGGCATTTGGGTATTTCTACATGGTTTCAGCATGGGGTGGTTATGTTTTTATCATTAACTTGGTTCCTCTTTATGTGTTGGTGATGTTGGTCACAGGGAGGTACTCCATGAGGCTCTATGTTGCGTACAATTGCATGTATGTGCTAGGAATGTTGCTTGCCATGCAAATAAGGTTTGTGGGATTCCAGCATGTGCAGTCTGGGGAGCATATGGCTGCCATGGGCGTGTTTTTCTTGCTTCAGGTCTTTTTCTTCTTGGATTGGGTAAAGCATTTGCTCAGTGACACAAAGTTGTTTCAAGCATTTTTGAGGATTACGGTAACCGGTGCAGTTAGTGTTGGAGCCATTGCTTTGGGAGTAGGCACAGCAACTGGTTTTATATCTCCATGGACAGGAAGGTTCTATTCCTTGCTTGATCCAACTTACGCAAAGGATCACATTCCAATTATTGCATCTGTCTCTGAGCATCAGCCGACAGCTTGGTCATCATTCATGTTTGATTTCCATATCTTGATGTTCCTTTTCCCCGCTGGGCTATATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTTATAATTTTGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTCCGATTAATTCTCGTTGCTACCCCTGCTGTATGTCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCGGGTGGTGAGGGCCAAAACCCAAGCTGTTCAAAGTGGTTCTAGTAAAGGAACTAGTACTGCAAAAGCTTCTTCTAAGGGTTTAGTTGATAACTCCCAGCCTTTTCAGAAAAATGGTGCTATTGTGTTACTTCTTGGGGCTTTCTTTCTGCTCAGTAGATATGCTTTTCACTGTACTTGGGTCACATCAGAGGCTTACTCATCTCCATCAATTGTCTTGGCTGCAAGGGGTGCCCATGGCAAAAGGGTCATCTTTGATGATTATCGTGAGGCATACTTTTGGCTCCGCCAGAATACTCCATCTGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGACATAATGAGATCGCTTGATGTTGACTATGTATTAGTTGTGTTCGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTTTGTGGATGGTGAGAATTGGTGGTGGAGTCTTTCCTGTTATAAAGGAACCTGATTACCTTGTCAATGGAGAATATCGCGTGGATAAGGGTGCAGCTCCTAAGATGTTGAACTGTCTTATGTATAAGCTGTCTTATTATCGGTTTGGGGAGATGACAACAGAGTATGGCAAACCACCTGGGTATGATCGTGCTAGAGGAGTGGAAATTGGAAATAAGGACATAAAGCTTGAGTACTTAGAAGAGGCATTCACTACCCAGAATTGGATAGTTCGTATTTATAAGGTGAAACCACCCAAGAACAGGTGGTAA 2148 0.4348 MVLDLLTKTLKLKTKQQEFLIRVTILTLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTRNGFYDFWNWFDSDSWYPLGRIIGGTLYPGLMVTAALIYRILHFLRFVVHIREVCVLTAPFFASNTTIVAYLFGKELWDSGAGLVAAALIAICPGYISRSVAGSYDNEAVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVMLVTGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKHLLSDTKLFQAFLRITVTGAVSVGAIALGVGTATGFISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILMFLFPAGLYFCFKRLSDATIFIILYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKTQAVQSGSSKGTSTAKASSKGLVDNSQPFQKNGAIVLLLGAFFLLSRYAFHCTWVTSEAYSSPSIVLAARGAHGKRVIFDDYREAYFWLRQNTPSDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGEMTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0517 715 Gene3D - 518 668 - -
Lal25g0517 715 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 9 715 - -
Lal25g0517 715 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 9 715 IPR003674 GO:0004576|GO:0006486|GO:0016020
Lal25g0517 715 Pfam Oligosaccharyl transferase STT3 subunit 23 501 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0517 Lal-Chr25 3686014 3692709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0517 8 714 Miscellaneous Gene Families AT1G34130 87.412 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0517 K07151 - gmx:100780916 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0517 25 3686014 3692709 Lal25g0517 25 3686014 3692709 ECH
Lal25g0517 25 3686014 3692709 Lal10g0911 10 16539747 16545119 LSH