Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0487 ATGGCGTTGCAATGGTTGATAATTTCTTATGTGGTTGCAATTGAAGCTGCTATTGTCATTATTCTAACCCTTCCTTCGCCAAAGCTCTTGAGAAATCGTATTGTTTCTCTTGTTTCCCTGATTCTACAACCTGCACTCTTCATTATACCCTTTGCAGGGTTCCAACTACTAGATTTATACTGGAAGAATGAGCATAGGCTGACGTGTTCCTCTGAGGTCTGTACTGCTACAGAGAGAGATCGATATGAGAAAGCTATATACAAAGCTCAGAGAAATGTGATACTGTGTGCTGCAGCAATTCTTATATATTGGTGTATCTCCAGAATTTGCAAGTATCAGAAGGATTTGCAGAGTTTGGAGGAAGTAGAAAAGAGATACAAGTCCAAGTAG 390 0.3974 MALQWLIISYVVAIEAAIVIILTLPSPKLLRNRIVSLVSLILQPALFIIPFAGFQLLDLYWKNEHRLTCSSEVCTATERDRYEKAIYKAQRNVILCAAAILIYWCISRICKYQKDLQSLEEVEKRYKSK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0487 129 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 127 IPR008417 GO:0005783|GO:0006886|GO:0016021
Lal25g0487 129 PANTHER BNACNNG71290D PROTEIN 1 127 - -
Lal25g0487 129 Pfam Bap31/Bap29 transmembrane region 1 122 IPR040463 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0487 Lal-Chr25 3401202 3403577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0487 - - mnt:21402288 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0487 25 3401202 3403577 Lal25g0487 25 3401202 3403577 ECH
Lal8g0481 8 3245897 3248366 Lal25g0487 25 3401202 3403577 LSH
Lal25g0487 25 3401202 3403577 Lal10g0943 10 16785706 16788267 LSH