Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0483 ATGGCGAATCCGAAAGCAGAGATCTTTGAACTCAACAATGGAACCATGCAAGTTCTCGTTTCCAATTTAGGCTGCACCATCACCTCTTTATCTGTACCCGACAAAGATGGCGTGTTGTCCGATGTTGTTCTTGGTCTTGACTCTCTTGATTCTTATCAGAAAGGTCTTTCTCCTTATTTTGGCTGCATTGTGGGTCGAGTTGCGAATCGAATAAAAGATGGGAAGTTTAGACTAGATGGGGTTCAATACTCTTTGCCTCTCAACAATCCTCCGAATAGTCTCCATGGTGGACATGTTGGGTATGATAAGAAGGTATGGGAGGTAGTTGAATATGCGAAAGGCGAAACCCCGTCGATCACTTTGAAGTATCACAGTCATGATGGAGAGGAAGGTTATCCTGGGGATGTAACTGTTACTGCAACTTACACACTCACCTCAAGCACAACTCTGAGGCTTGACATGGAAGGAGTTCCAAAGGACAAACCCACCATAATCAACTTAGCTCAGCATACATATTGGAACTTAGCTGGCCACGACAAGGCGAACATACTCGACCATTCGATTCAGATACTGGCTAATCATGTAACTCCCGTGGATCAGAATTCTGTGCCAACAGGTGAAATCATGCCTGTGAAAGGTACCCCTTTCGATTTCACTTCTGAGAAGAGAATAGGCAACACCATCAATGAGGTTGGAATAGGATATGATCACAATTATGTGCTTGATTGTGGAGAGGAGAAAGCAGGTTTGAGACATGCTGCAAAAGTGAGGGATCCATTAAGTTCAAGGGTGCTAAACTTGTGGACAAATGTCCCAGGGGTGCAGTTTTACACCGCGAACTATGTTAACGGCATTGCAGGAAAAGGCGGTGTTGTCTATGAAAAGCATGCTGGGTTGTGTCTTGAGACACAGGGGTTCCCTAATGCTATAAACCAACCAAATTTCCCATCTATTGTGGTTAAACCTGGTGAGAAGTACCAGCATTCCATGTTGTTTGAGTTTTCAATTGAGTGA 1014 0.4408 MANPKAEIFELNNGTMQVLVSNLGCTITSLSVPDKDGVLSDVVLGLDSLDSYQKGLSPYFGCIVGRVANRIKDGKFRLDGVQYSLPLNNPPNSLHGGHVGYDKKVWEVVEYAKGETPSITLKYHSHDGEEGYPGDVTVTATYTLTSSTTLRLDMEGVPKDKPTIINLAQHTYWNLAGHDKANILDHSIQILANHVTPVDQNSVPTGEIMPVKGTPFDFTSEKRIGNTINEVGIGYDHNYVLDCGEEKAGLRHAAKVRDPLSSRVLNLWTNVPGVQFYTANYVNGIAGKGGVVYEKHAGLCLETQGFPNAINQPNFPSIVVKPGEKYQHSMLFEFSIE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0483 337 CDD galactose_mutarotase_like 12 334 - -
Lal25g0483 337 PANTHER ALDOSE-1-EPIMERASE 6 336 - -
Lal25g0483 337 PANTHER ALDOSE 1-EPIMERASE 6 336 - -
Lal25g0483 337 SUPERFAMILY Galactose mutarotase-like 5 335 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lal25g0483 337 PIRSF GALM 1 337 IPR015443 GO:0016853|GO:0019318
Lal25g0483 337 Pfam Aldose 1-epimerase 9 332 IPR008183 GO:0005975|GO:0016853
Lal25g0483 337 Gene3D - 2 337 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0483 Lal-Chr25 3350208 3353736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0483 5 335 Miscellaneous Gene Families AT3G47800 50.453 3.77e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0483 K01785 - gmx:100776238 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0483 25 3350208 3353736 Lal25g0483 25 3350208 3353736 ECH