Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0464 ATGCTAGGGACTACCCTTCAGTTTGGGGGTGTTAATGGTGATGATCAGTTTTACATTCCTGTAAGATCAAGGAAAAATCAGAATCAGCGTAAACAAGCTCAGAGAACACAGAGTGATGAAACTGAGTGTGCAGATTCAGCTTCAAAGACAAAGCTTGTTGCTTCTGAGAGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCCTAATGAGTCTTTGAAGAAACCATCTTCAGGGAATTTAGAACCTTCTAGTAACATTGATAGGTTCCTGAAGTACACAACTCCAATTGTCCCAGCTCAGTATTTCTCTAAGGTTGATGATCTCTTCAGCTCTTTATGGAATTTCAACTCCATTCAGACAACAATGAGAGGTTGGAAGACTTGTGATGTTGAGTATCAATCTTACTTTGACCTGAATGATCTATGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGCAGGAGTCCCCTTGCTACTTGATCAAGGAGAATCTGTTGTTCAATATTATGTTCCTTATTTGTCTGCTATTCAACTATATGGTCAATCATCTAAGAAACCAAATGCTAAGCCGAGGTACACTGAAGATAGTGATGGAGATTACTACAGAGACTCAAGTAGTGATGGGAGCAGCGATTATGAATTAGGAAAAAGGAATGAACTCTTTACATCACAAAGTAGTAAATATCGAGCAGGCAATGTTTCGTTTCAAATGAGCAAGTTATCAGTACATGGTAAAAACAACATAATGCAAGATGGATTTTCTAGTGATGACAGTGAAACTGGGAATCCTCAAGATCTCTTTTTTGAATATTTTGATCAAGATCCTCCTTATAGCCGTGAGCCATTGGCTGATAAGATAATAGATCTTGCACGCCACTATCCTAGCCTCAAGTCGATGAGAAGCTGTGATTTATTGCCACCGAGTTGGATGTCTGTGGCATGGTATCCTATATATCGAATACCTACAGGTCCAACATTAAAAGATTTAGATGCCTCCTTCCTTACATACCATACTCTACACACTCCCCTGTCAGGAAATGGATCTACACAGACTCCAATCATGGTTTATCCCAGTGAGATGGATGGCATACCAAAGATTTCCTTACCAACTTTTGCTATGGCTTCCTATAAGTTAAAGGGATCTGTTTGGATGCAAAATGAAGATAGTGAGAATGAAGTAGCAAATTCTCTCTTGCAGGCTGCAGATAAGTGGTTAAAGCTGCTTCAGAATATGACTGTGAGAACACCTGGAACACCAGCTTCAAAGATTGATAGAACACCGGTATCAACCCCTGGAGGGCCTAGAGTTAGGGAGGAGAAAATTGTGGTAACAGTAAGACTAAGGCCTTTAAACAGAAGGGAGCAATTGGCTAAAGATCAGGTGGCATGGGATTGCGTCGATGATTATACAATCGTGTATAAATCACCCTCGCATGAACGCACAGCTCAATCGGCATCGTTTACTTTTGATAAAGTTTTTGGTCCTGCTTGTTTAACTGAGTCAGTATATGAAGGAGTAAAGAATGTTGCATTATCTGCATTGATGGGCATTAATTCTACTATTTTTGCTTATGGACAAACGAGTAGTGGTAAGACATACACAATGAGAGGAATAACAGAAAAGGCTGTCAATGATATCTATGAACATATAATGAATACTCCAGAAAGAAATTTCACTATAAAAATATCTGGACTAGAAATATACAATGAGAATGTTAGGGACTTGTTAAATTCAGAATCCGGTCGCAATTTGAAGCTTCTAGATGATCCTGAGAAAGGTACTGTGGTGGAGAAATTGGTGGAAGAAACAGCAAAAGATGACAAACATTTGAGACATTTGATTTCTATTTGTGAAGCTCAAAGGCAGGTCGGCGAAACTGCACTAAACGATAACAGCTCACGTTCTCACCAGATAATAAGACTGACAATTCAAAGTGCTCAGCGTGAAAATGCAGATTGTGTGAGATCTTTTGTTGCAACCCTGAACTTTGTTGATCTGGCCGGAAGCGAGAGGGCTGCACAGACACAGGCAGATGGCACTAGGCTTAGAGAAGGTTGTCATATTAACCTTAGCTTGATGACTCTTACAACCGTAATCAGGAAGCTCAGTGTTGGAAAAAGAAGCGGTCACATACCTTACAGAGATTCAAAGCTCACACGTATATTGCAACACTCCCTTGGTGGGAATGCACGCACTGCCATCATATGTACGTTAAGTCCAGCCCTAAGCCATTTAGAGCAATCACGAAACACTCTCTTCTTTGCTACCCGGGCAAAGGAAGTAACAAATAATGCTCAAGTTAACATGGTTGTTTCAGAAAAGCAGCTTGTAAAACATTTGCAAAAGGAAGTAGCGAGGCTGGAAGCAGAGCTGTGCACCCCTGATCCATCTAAAGAAAAGGATTGGAAAATTCAGCAGATGGAAATGGAAATAGAAGAACTGAGACGCCAGAGAGATCTTGCACACGCTCAGGTTGATGAGTTACGCAAAAAACTTCAGGATGACCAGCAGCAGGTCTCAAACCAACTTGAATCACAACATCTGCCAGTCAAGAAGTGCCTCTCATTCACTGGTGCAGCATTGCCAAAACCCAAGCTAGGTTCTGAGAGAGTAAGAAACACCATATTAAGACAGTCTATGAGGCAGTCATCTACTGCTCCTTTTACCCTTATGCATGAAATTCGCAAACTTGAGCACCTCCAAGAGCAGCTGGGTGAAGAAGCCAATCGAGCTTTGGAAGTATTACAAAAGGAAGTGGCATGCCATAGACTGGGTAACCAAGATGCAGCCGAGACAATTGCAAAGCTGCAAGCTGAAATAAGGGAAATGCGTTTTGTTAGGCCAGCACCAAAGGAAGTTGAAGTTGGAAACATGGTTTCTGTACATAAGAGTGTGAGTGCTAATCTCAAGGAAGAGATTACGAGACTTCATTCACAGGGAAGCACCATTGCAAATCTTGAACAGCAGCTTGAAAATGTTCAGAGGTCAATAGACAAGTTGGTGATGTCTCTCCCAAACAATTTTCAACAGATAACCAATGAAGCATCTCCCAAGCATAAAAAGGAACACAAGAAGAAAAAGTTGCTTCCTTTGTCTTCAAGTAATGCAGTTAATCGACCAAACTTTCTAAGATCTCCCTGCTCTCCATTATCAACTACTCAGCAAGTTTTGGAATCCGAGATTGAAAACAAAGCCCCTGAGGTAAATGATGACACTGTTTCAATTGAGACTCTGCCGGAGTCTGAGAAGGACACTCCATCAAAGAGTGAGGAAGGTGGAGATGTATCATCAAAGGAAAATACTCCAGGCCATAGACGCTGTAGTTCAGTTAATATGAAGAAAATGCAGAAAATGTTCCAGAATGCAGCAGAGGAGAATGTAAGAAGCATACGAGCATATGTCACAGAATTGAAGGAACGAGTTGCCAAGCTGCAGTACCAAAAGCAGTTGCTTGTTTGCCAGGTGCTTGAGCTTGAAGCAAATGAGGCAAATGGCCAAGACATAGGAAGTGAAGAGTACTCAGGTGAACTGGATGAACCCCAGGTTTCATGGCAAATTACATTTAAAGAGCAGCGGCAGCAGATAATCGAATTATGGGATGTATGTTATGTCTCCATTATTCACAGGACCCAGTTTTACTTGTTATTCAAGGGAGACCCAGCAGATGAAATATACATGGAAGTTGAACTACGGCGTTTGACATGGCTGCAACAACACCTAGCAGAAATTGGGAATGCAAGCCCCGCTCCTCATGTTGGTGATGAACCTACTGTCTCGCTGTCATCAAGTATGAAAGCGTTGAAACGAGAAAGGGAATTCCTTGCTAAGAGATTGACATCGCGTATGACACCAGAGGAGAGGGATGCATTATATATCAAATGGGATGTTCCCCTTGATGGTAAGCAGAGGAGGTTGCAATTTGTGAGCAAGCTTTGGACAGATCCTCATGATCCAAGGCATGTATTGGAGAGTGCTGAAATAGTTGCAAAGCTTGTTGGTTTCTGTACAGGAGGCAACATGTCTAAGGAGATGTTTGAGCTCAATTTTGTGCTTCCATCTGATAAGAGACCATGGTTAATGGGATGGAATCCAATCACAAATTTGCTTAATTTGTAG 4131 0.4108 MLGTTLQFGGVNGDDQFYIPVRSRKNQNQRKQAQRTQSDETECADSASKTKLVASESNNNNNNNNNNNNNNNPNESLKKPSSGNLEPSSNIDRFLKYTTPIVPAQYFSKVDDLFSSLWNFNSIQTTMRGWKTCDVEYQSYFDLNDLWESFKEWSAYGAGVPLLLDQGESVVQYYVPYLSAIQLYGQSSKKPNAKPRYTEDSDGDYYRDSSSDGSSDYELGKRNELFTSQSSKYRAGNVSFQMSKLSVHGKNNIMQDGFSSDDSETGNPQDLFFEYFDQDPPYSREPLADKIIDLARHYPSLKSMRSCDLLPPSWMSVAWYPIYRIPTGPTLKDLDASFLTYHTLHTPLSGNGSTQTPIMVYPSEMDGIPKISLPTFAMASYKLKGSVWMQNEDSENEVANSLLQAADKWLKLLQNMTVRTPGTPASKIDRTPVSTPGGPRVREEKIVVTVRLRPLNRREQLAKDQVAWDCVDDYTIVYKSPSHERTAQSASFTFDKVFGPACLTESVYEGVKNVALSALMGINSTIFAYGQTSSGKTYTMRGITEKAVNDIYEHIMNTPERNFTIKISGLEIYNENVRDLLNSESGRNLKLLDDPEKGTVVEKLVEETAKDDKHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSAQRENADCVRSFVATLNFVDLAGSERAAQTQADGTRLREGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALSHLEQSRNTLFFATRAKEVTNNAQVNMVVSEKQLVKHLQKEVARLEAELCTPDPSKEKDWKIQQMEMEIEELRRQRDLAHAQVDELRKKLQDDQQQVSNQLESQHLPVKKCLSFTGAALPKPKLGSERVRNTILRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIREMRFVRPAPKEVEVGNMVSVHKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPNNFQQITNEASPKHKKEHKKKKLLPLSSSNAVNRPNFLRSPCSPLSTTQQVLESEIENKAPEVNDDTVSIETLPESEKDTPSKSEEGGDVSSKENTPGHRRCSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEANGQDIGSEEYSGELDEPQVSWQITFKEQRQQIIELWDVCYVSIIHRTQFYLLFKGDPADEIYMEVELRRLTWLQQHLAEIGNASPAPHVGDEPTVSLSSSMKALKREREFLAKRLTSRMTPEERDALYIKWDVPLDGKQRRLQFVSKLWTDPHDPRHVLESAEIVAKLVGFCTGGNMSKEMFELNFVLPSDKRPWLMGWNPITNLLNL 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0464 1376 Coils Coil 802 850 - -
Lal25g0464 1376 Coils Coil 902 922 - -
Lal25g0464 1376 Coils Coil 981 1008 - -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 188 218 - -
Lal25g0464 1376 SMART kinesin_4 443 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 MobiDBLite consensus disorder prediction 1081 1106 - -
Lal25g0464 1376 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 799 IPR027417 -
Lal25g0464 1376 ProSiteProfiles Kinesin motor domain profile. 445 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 Pfam Domain of unknown function (DUF3490) 1193 1356 IPR021881 -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 193 218 - -
Lal25g0464 1376 Pfam Kinesin motor domain 451 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 PANTHER KINESIN-LIKE PROTEIN KIN-7A 430 1375 - -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 47 85 - -
Lal25g0464 1376 PANTHER CENTROMERE PROTEIN E 430 1375 - -
Lal25g0464 1376 Coils Coil 775 795 - -
Lal25g0464 1376 Pfam Protein of unknown function (DUF789) 89 414 IPR008507 -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 1 85 - -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 1036 1065 - -
Lal25g0464 1376 MobiDBLite consensus disorder prediction 1017 1113 - -
Lal25g0464 1376 CDD KISc_CENP_E 445 766 - -
Lal25g0464 1376 ProSitePatterns Kinesin motor domain signature. 664 675 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal25g0464 1376 Gene3D Kinesin motor domain 439 796 IPR036961 -
Lal25g0464 1376 PRINTS Kinesin heavy chain signature 521 542 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 PRINTS Kinesin heavy chain signature 631 648 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 PRINTS Kinesin heavy chain signature 665 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0464 1376 PRINTS Kinesin heavy chain signature 716 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0464 Lal-Chr25 3182480 3192385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0464 436 841 Miscellaneous Gene Families AT5G06670 40.144 2.53e-80 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0464 K11498 - gmx:100775206 1646.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0464 25 3182480 3192385 Lal25g0464 25 3182480 3192385 ECH
Lal25g0464 25 3182480 3192385 Lal10g0971 10 16992967 16999301 LSH