Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0461 ATGTCTTCTTCTTCTTCAATCATGGATAACCTCTTCCAACGAACCCTAGATGATGTCATCAAATCCACGCGCCTCACCTTCCTCCCTGAACACGCGTTCATCTCAAACGCCATGGATGAAATCCGCAAAGAAATCAAATCCACCGATCCTCACACCAAATCCACCGCACTTCAAAAACTCTCTTACCTTTCTTCTCTTCATGGAATCGACATGTCTTTCGCTTCTTTCCACGTTGTCGAAGTTATCTCATCTTCTCGATTTTCTCACAAGAAAATTGGGTACCTTTCTGCTTCACAATCCTTCAATGATTCCACACCTGTTCTTCTCTTAATCACAAATCAGCTTCGTAAGGATTTAACATCTAACAATAGTTTTGAGGTTTCTCTTGCACTTCAATGTTTGTCAAATGTTGCAAGTTTAGATCTTGCAAGAGATTTAACACCTGAGGTTTTCACCTTGTTGTCTACCTCTAAGGTTTATGTTAGGAAAAAAGCTGTTGGTGTTGTTTTGAGGGTTTTTGAAAAATACCCTGATGCTGTTAGAGTGTGTTTTAAGCGTTTGGTTGAGAATTTAGAGAGTTTGGATCCACCAATTGTGGTTGCTGTTGTTGGGGTTTTTTGTGAGCTGGCTTCGAAGGATCCGCCGGCTTATCTTCCTTTGGCGCCCGAGTTTTATAGGATTTTGGTTGATTCTAAGAATAATTGGGTTCTTATTAAGGTGCTTAAGATTTTTGCTAAGTTGGCGCCTTTGGAACCGAGGTTGGCCAAGAGGATTGTTGAGCCGGTTTGTGAGGTTATGAGGAGGACCGAAGCGAAGTCGTTGATGTTTGAGTGTGTTAGGACTGTGGTTACTAGTTTGAGTGATTATGAGTCTGCAGTTAATCTGGCGATGGAGAAGATTAGGGAATTGTTGGTTGAGCAGGATCCGAATCTTAGGTATCTTGGACTCCAAGCACTCTCGGCTGTTGTAGGGAAGCACTTGTGGGTGGTGTTGGAGAATAAGGAAGCTGTGATTAAGTCGTTGAGTGACGAGGATCCTAATATTAAGCTTGAGTCTTTGCGTCTGGTGATGGCGATGGTGTCCGATAGCAATGTGGAAGAGATCTGCAGAGTGTTGGTGAATTATGCATTAAAATCTGACCCTGAATTCTGCAATGAGATTTTGGGTTCCATTTTGGAAACATGTTGTAAGAATGTGTATGAGATTATTGTTGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGTCAAGGATTCCAAATTGCCAAAAGGGTGAAGAAATTGAGAATCAGCTTATTGACATTGGTTTGAGAGTTAGGGATGCTAGATTGCAGCTTGTTCGGGTTGGGCGCGATCTTTTGATTGACCCTGCATTACTTGGTAATGTGTACTTGCATAGGATACTATGTGCTGCTGCTTGGGTTGTAGGGGAGTATGTTGAGTTTGCGAGCAACCCGTTTCAACTTATGGAGGCACTCCTACAACCTCGTACCAATCTCTTGCCGCCATCAATAAGGGCAGTTTATATTCATTCTGCTTTTAAAGTATTAATTTTTTACTTGGATAATTACCTTCAAAATGGAGGTGCTGCATCCTCATATTCAAGTAATTTGGCAGGGGATGATTCAGAGTTAGTTAACGGAAAAAAGAGCACAGAGGCTCCTGATTTGTCAAAGTCTGAAAGTCTAAATTATGACCCGGATGAAGGTTTTAACCCAAGGAATATAACTGAGTCTTCTGAAGATTCTCCAGTTGATAACAACGTGGATAGAATTGTTAATCATGGTCAGACTTTTACACCAACTTTTCTGGAGAAGAATAATTTCACGCATGAGTCCGTTGTTAGCCTGTTAGATCTTATTGAATTAGTTTTGGGCCCGCAAACAGCGAATGAAGATGTTGAAGTACTGGAGAGAGCACAGAATGTTGTCGCCTTTGTAAATTTGGTTAAGATGGACATACTTGATTGTTCAGTCCAGAATGTGGACATTTTGGGAAAGAAAAATGCTCAAGTCTCAGCTATTATTCAATTGATGAGTGATGCTTTTTCAGTGGAACTTGGTCTGGTCTCAATAAGTGCACAGGGTAGAGTTGCTGTACCAGATGGATTAGTTCTTACGGAGAATCTTGATGACTTACAATCAATTTGTGGTGATATTCAACTTCCTTCTAGTTCATTTGGGGTAGGAGGCCATCATGTTGACACTACTTTTGATGATTCCTCGTCTAATCTTGTGAAAAGTGAAGAGTCAGGGCCAGCAAATGAATCTACATCGTTGCTTGAACACCGTAAGCGGCATGGGTTATATTACCTTCCTTCAGAAAAGAATGGTGCTGTTTCAGTTGATTATCCTCCTGCCAATGACCCGGAGTTAAACAGTAATATAAATGATGAAGCTGAAAATCTAGCCAGGTTGACTGAGCAATCACTTCTATTGAAGAAAAAACCGAACCAAATGAAGCCCAGGCCTGTAGTGGTGAAACTCGATGATGGAGATGTGGCACCAATTTTGGTCAAGAGGCCAGAGCCAAGGGATGATTCACTTTCTGGTGTTGTCAGAGATGTCCTCCTAGGAAATGAGGCCAGGCCAAGTTCTTCACGAAGTAACCCTTCCAATAAGACATCGGGCAAGGCAAAAGAAAAGAAGAAACTAAGTACAGATCTTGCGTCTGAAACGAAAGAACAATTGGGTGATGCAGAAAAGCTAGACCTTGAAAATCGGAATTCAAGGAGCAAACACCACAGTCATAATAAAGAGAGAAGACGAAGAAGCCCAGGGAAAACTGTTGAAGAAGGGGAAGAACATGATCAGAAGGGGAAGAAGAAGAGTAGTCACCGCCATGGTAGGCATAAAACTCGTCAAAGAGCCAATTCACCCTTGAATTCACAAACACCAGTAATTCCAGATTTTCTGTTGTAG 2922 0.4155 MSSSSSIMDNLFQRTLDDVIKSTRLTFLPEHAFISNAMDEIRKEIKSTDPHTKSTALQKLSYLSSLHGIDMSFASFHVVEVISSSRFSHKKIGYLSASQSFNDSTPVLLLITNQLRKDLTSNNSFEVSLALQCLSNVASLDLARDLTPEVFTLLSTSKVYVRKKAVGVVLRVFEKYPDAVRVCFKRLVENLESLDPPIVVAVVGVFCELASKDPPAYLPLAPEFYRILVDSKNNWVLIKVLKIFAKLAPLEPRLAKRIVEPVCEVMRRTEAKSLMFECVRTVVTSLSDYESAVNLAMEKIRELLVEQDPNLRYLGLQALSAVVGKHLWVVLENKEAVIKSLSDEDPNIKLESLRLVMAMVSDSNVEEICRVLVNYALKSDPEFCNEILGSILETCCKNVYEIIVDFDWYVSLLGEMSRIPNCQKGEEIENQLIDIGLRVRDARLQLVRVGRDLLIDPALLGNVYLHRILCAAAWVVGEYVEFASNPFQLMEALLQPRTNLLPPSIRAVYIHSAFKVLIFYLDNYLQNGGAASSYSSNLAGDDSELVNGKKSTEAPDLSKSESLNYDPDEGFNPRNITESSEDSPVDNNVDRIVNHGQTFTPTFLEKNNFTHESVVSLLDLIELVLGPQTANEDVEVLERAQNVVAFVNLVKMDILDCSVQNVDILGKKNAQVSAIIQLMSDAFSVELGLVSISAQGRVAVPDGLVLTENLDDLQSICGDIQLPSSSFGVGGHHVDTTFDDSSSNLVKSEESGPANESTSLLEHRKRHGLYYLPSEKNGAVSVDYPPANDPELNSNINDEAENLARLTEQSLLLKKKPNQMKPRPVVVKLDDGDVAPILVKRPEPRDDSLSGVVRDVLLGNEARPSSSRSNPSNKTSGKAKEKKKLSTDLASETKEQLGDAEKLDLENRNSRSKHHSHNKERRRRSPGKTVEEGEEHDQKGKKKSSHRHGRHKTRQRANSPLNSQTPVIPDFLL 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0461 973 MobiDBLite consensus disorder prediction 740 761 - -
Lal25g0461 973 PIRSF AP3_delta 1 967 IPR017105 GO:0015031|GO:0030123
Lal25g0461 973 MobiDBLite consensus disorder prediction 875 913 - -
Lal25g0461 973 MobiDBLite consensus disorder prediction 573 587 - -
Lal25g0461 973 PANTHER DELTA ADAPTIN-RELATED 4 972 IPR017105 GO:0015031|GO:0030123
Lal25g0461 973 Coils Coil 286 306 - -
Lal25g0461 973 MobiDBLite consensus disorder prediction 924 941 - -
Lal25g0461 973 SUPERFAMILY ARM repeat 30 522 IPR016024 -
Lal25g0461 973 MobiDBLite consensus disorder prediction 740 758 - -
Lal25g0461 973 MobiDBLite consensus disorder prediction 858 973 - -
Lal25g0461 973 MobiDBLite consensus disorder prediction 545 587 - -
Lal25g0461 973 Pfam Adaptin N terminal region 32 490 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lal25g0461 973 Gene3D - 6 539 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0461 Lal-Chr25 3164814 3167735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0461 K12396 - gmx:100815221 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0461 25 3164814 3167735 Lal25g0461 25 3164814 3167735 ECH