Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0450 ATGATTTATGCTACCTTATCTTCTACTACTTTTTTGTGGGCCAATAACCAATTAGTAGTGAACAAAACAAAGCCCAAAATAACCCAAACAACAAAAAACATCGAAAACTCCACACATTCTCAATATTCACAAACTCAGAAGCGACTGAAGAAGAAGAAGGTGATAAGAATTTTGAGAATGGGAAGGAAGAAAGGTAAGGTTGAATTCGATGAATTTCCACCGGACAATTTCGATCCTGAAAATCGATATAAGGATCCAGTTGTGTATCTTGAAATGAGAGAACACATTGTCAGAGAAAAATGGATCCAAATCGAGAAAGCCAAAATCATCAGAGAACAACTTCGTTGGTGTTATCGCATCGAAGGTGTTAACCATCTTCAGAAATGTCGCCACCTTGTTACTCAGTACCTTGAATCCACTCGTGGTATTGGTTGGGGCAAAGATGGTCGTCACCCTTCTCTCCACGGGGATATTGATTACCTGAAATCAGATACTGGGTGTAATGCAGATGTTGCAGTTATTTTGTTCTTGTTCTTTTTCCTTACTCAAACTTCCTTTGAACTATTATACCTGTATTTTGGCTTAGCCTGGACTATTTTTGCTTTAGGTTTTTTTGTTGCTTGTTAG 627 0.3796 MIYATLSSTTFLWANNQLVVNKTKPKITQTTKNIENSTHSQYSQTQKRLKKKKVIRILRMGRKKGKVEFDEFPPDNFDPENRYKDPVVYLEMREHIVREKWIQIEKAKIIREQLRWCYRIEGVNHLQKCRHLVTQYLESTRGIGWGKDGRHPSLHGDIDYLKSDTGCNADVAVILFLFFFLTQTSFELLYLYFGLAWTIFALGFFVAC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0450 208 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT 60 157 IPR039993 -
Lal25g0450 208 PANTHER BNAA01G26750D PROTEIN 60 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0450 Lal-Chr25 3092075 3095294 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0450 K03966 - gmx:100500620 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0450 25 3092075 3095294 Lal25g0450 25 3092075 3095294 ECH
Lal25g0450 25 3092075 3095294 Lal10g0983 10 17087721 17089791 LSH