Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0448 ATGGCTAGCCGCAGTCACCGAAAACCTCCACCGGAAAATTCAAACGGCAGTTATCATTCAAAACGGAGAATACCTTATCAATTGAAACCATCAGCATTATTGTCTCATACTAAACGGCGCAGATTCAATTCAAACTCCCAAACCGTGACCCGACACACCAATAACCCTTCTCGCTCAAACCGGTTCGAACCCTTTCGTTCTTCGTCTAAGTCTCGCAGAAATAATAGGGATGAAAAATCAATCAGAAGCAGTATTATAGAAGATTGTTCTTCTAGAACATGGACTTTTTCTTCCACAGATTGTTCTAACTCCCAGGATAAGGTGGTAGTTGTTTCATACAATATACTTGGTGTTGACAATGCATCAAAGCATATGGATTTGTATCCCAATGTTCCACGTAGTTTCTTGGACTGGGATAGGCGGAAAGGACTCATACTTGAAGAAATTGATAACTATAGTGCAGGCATACTGTGTTTTCAGGAGGTTGATCATTTTAATGATTTGGAGTATCTTTTCCAGAACCATGGCTTTAAAGGTGTTTACAAGGCCCGCACAGGGGAAGCACTTGATGGGTGTGCTGTATTCTGGAAAGATAGTTTATTCACTCTTTTGGATCAAGAAGATATAGAGTTCCAAAGATTTGGCCTACGTAATAATGTTGCTCAGATTTGTGTTTTGGAGGTAAAACATGATGAACTGGAATCTGATACATGTGCCCTAACGGAAGTGTGGCGCCTATTTCATGATCATGTTTTTTCATACTTCCAGCTTAGCAACTTGCTTTATCTCCCATCTAATAGGACACCATCGACCAGAAAAAGAAGATTTTTGATCGGAAATATACATGTGTTGTTCAACCCAAATCGTGGAGACATCAAACTTGGCCAGGTCAGACTTTTACTTGATAAAGCCTACAAGTTATCACAAAAATGGGGCAGCATCCCTGTTATTATTGCTGGGGACTTAAATAGCGTTCCACAGAGTGCAATATATGAATTCATGGCTTCATCCAAGTTAGACATCCAATTACATAATCGCAGAAATATATCAGGACAGCTTGATATCGAGTCCAATAACAGAGTCTTCAGATCACAGATTGGTGATGAAGCTAGCTTTTCAATGTCTATTTCAAGGCGAGTGTTATACCAATGGAGTATAGAGGAACTAAGGCTTGCAACTGGCGCAGCAGGAGTCACTCATCTTCAGCACCACCTGAAGCTCTGCAGTGCTTATAGTGGTGTTCCAGGTAACAACAGAACAAGAGATGATATTGGGGAGCCATTAGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCGGAGGAACTGGTTCCGGTTAAAGTTCTTGAAACCATGCCCATTGATATTCTTAGAAGAACTAGGGGACTCCCCACTGAGAAATGGGGCAGTGACCACCTTGCACTTGTATGTGAATTCGCTTTTGCCAACAATGGCAATGTGTCTTGA 1485 0.4128 MASRSHRKPPPENSNGSYHSKRRIPYQLKPSALLSHTKRRRFNSNSQTVTRHTNNPSRSNRFEPFRSSSKSRRNNRDEKSIRSSIIEDCSSRTWTFSSTDCSNSQDKVVVVSYNILGVDNASKHMDLYPNVPRSFLDWDRRKGLILEEIDNYSAGILCFQEVDHFNDLEYLFQNHGFKGVYKARTGEALDGCAVFWKDSLFTLLDQEDIEFQRFGLRNNVAQICVLEVKHDELESDTCALTEVWRLFHDHVFSYFQLSNLLYLPSNRTPSTRKRRFLIGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQKWGSIPVIIAGDLNSVPQSAIYEFMASSKLDIQLHNRRNISGQLDIESNNRVFRSQIGDEASFSMSISRRVLYQWSIEELRLATGAAGVTHLQHHLKLCSAYSGVPGNNRTRDDIGEPLATSYHSKFMGTVDYIWHSEELVPVKVLETMPIDILRRTRGLPTEKWGSDHLALVCEFAFANNGNVS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0448 494 Pfam Endonuclease/Exonuclease/phosphatase family 111 478 IPR005135 GO:0003824
Lal25g0448 494 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 52 487 - -
Lal25g0448 494 MobiDBLite consensus disorder prediction 65 81 - -
Lal25g0448 494 PANTHER PROTEIN ANGEL 52 487 - -
Lal25g0448 494 SUPERFAMILY DNase I-like 107 486 IPR036691 -
Lal25g0448 494 MobiDBLite consensus disorder prediction 1 81 - -
Lal25g0448 494 Gene3D Endonuclease/exonuclease/phosphatase 83 493 IPR036691 -
Lal25g0448 494 MobiDBLite consensus disorder prediction 37 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0448 Lal-Chr25 3083629 3090441 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0448 - - lang:109351372 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0448 25 3083629 3090441 Lal25g0448 25 3083629 3090441 ECH