Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0438 ATGGACGCTCCGCAAGGTGGATCCGGATCCGAAAGAGACAAATCCAACACTTCCTCTTCTCCGATCTCCGTCGTAACCGCTTTCTGGAAAGATTTTGAATTGGAGAAGGAGAAATCGATTTTGGATGAACAAGGCCTTCGTATTGCAGAAAACCAGGAAAATAGTCAGAAAAATAGGCGTAAACTTGCGGAGAATACTAGAGATTTCAAGAAAGCTTCACCTGAGGATAAGTTAAGTTTGTTTAACTCCTTGCTTAAGGGCTACCAGGAAGAGGTTGATAATCTTACTAAGAGAGCGAAATTTGGAGAAAATGCATTTCTCAATATCTATCAAAAGCTATATGAAGCTCCAGATCCTTATCCTGCCCTTGCATCGATTGCTGAGCAAGATCTCAAGTTATCCGAGCTAGAATCTGAGAACCGGAAAATGAAAGTTGAACTTGAGGAATTCAGGACAGAGGCAACTCACTTAAAGAATCAGCAGGCCACAATACGAAGACTCGAAGAGAGAAATCGACAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGATCAAGCAACGCAGTCTAGCAGAAGAGAATCAGAAAACACTGGAAGTTTTGAAAGAAAGGGAACAAACACTGCAAGACCAGTTGCGGCATGCCAAAGATAGTGTTTCCAATATGCAGAAATTACATGAACTTGCACAAAACCAATTGTTTGAGCTCCGTGCCCAATCTGATGAAGAGAGGGCTTCTAAGCAATCAGAGGTCAGTCTTCTGATGGATGAAGTTGAACGAGCACAGACAATGCTTCTTAGTTTGGAAAGAGAAAAGGGGGTTCTCAGATCTCAGTTACAAACAAATGAAGAGACTGGAACTAAGACAAGCGATACTTTAGACTCAAATACCGTACTTGAGAATTTTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAGACAACCTTATCAAATGAAAGAGAACAACACATAAATGAAGTCAAGAAACTCAATGCAATGCTCAATGAAAAGGAGGCTGCTCTTGAGGTGATGAAGAAAGAGCTTCAAGCAAGGCCAACAGAAAAAATGGTTGATGATCTGCGTAAGAAAGTGAAGATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGACTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGCAAAGTTGAACATGAACTAACACAGTTGAAGGTCAAACTTTCAGAGAAAACATCCTTAATGGAAAAAGCAGAAAAGAAGATAACAGAACTTACAGCAAAGGTTAATGAACAACAAAAGTTGATACAGAAGTTGGAAGACGATATATCGAAGGGCTATAGTTCCAATCCAAAAGATCGTAAAGGGACTTTCCTTGATGACTGGGATCTTTCAGAAGCTGGTGGTGGTGAGACATCTGAGAATACAGACCAAAGGCAAGCATCCTTAGACCAAGATCAAAGCTCAATGCTTAAAGTTATATGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGATGTTGAAGGAGAAGATTGGGGTGCTCACAGTGGAACTGGAGAAGACTAAAGCTGATAATGTTAAATTATACGGGAAGATTCGTTATGTCCAAGATTATAATAATGAGAAAGTGGTTTCTCGGGGTTCTAAAAAGTATGCAGAAGATCTTGAAAGTGGTTTCACATCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGCTGCATTCTCCAAAAAGGAAAGGGATCAAAGATACAAGGAGCTGGGATTCAGGGACAGAATTACACTCAGCAGTGGACGTTTTCTCCTTGGTAACAAGTATGCACGCACTTTTGCATTCTTTTATACCATTGGATTGCATATCCTGGTCTTCACTTGCCTCTATCGAATGTCTGCTCTGAGTTATCTTAGCAATGGCCCAGAGGAGTTCCTGATTGGAGAGAAAAACGTTGATTTACCACGTGCACCGTAG 2061 0.4047 MDAPQGGSGSERDKSNTSSSPISVVTAFWKDFELEKEKSILDEQGLRIAENQENSQKNRRKLAENTRDFKKASPEDKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTLEVLKEREQTLQDQLRHAKDSVSNMQKLHELAQNQLFELRAQSDEERASKQSEVSLLMDEVERAQTMLLSLEREKGVLRSQLQTNEETGTKTSDTLDSNTVLENFLNAKEKLISELNMELHNIETTLSNEREQHINEVKKLNAMLNEKEAALEVMKKELQARPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKVEHELTQLKVKLSEKTSLMEKAEKKITELTAKVNEQQKLIQKLEDDISKGYSSNPKDRKGTFLDDWDLSEAGGGETSENTDQRQASLDQDQSSMLKVICNQRDRFRTRLRETEEEIRMLKEKIGVLTVELEKTKADNVKLYGKIRYVQDYNNEKVVSRGSKKYAEDLESGFTSDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSYLSNGPEEFLIGEKNVDLPRAP 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0438 686 Coils Coil 254 274 - -
Lal25g0438 686 MobiDBLite consensus disorder prediction 1 20 - -
Lal25g0438 686 PANTHER HOMEOBOX PROTEIN CUT 21 670 - -
Lal25g0438 686 MobiDBLite consensus disorder prediction 486 502 - -
Lal25g0438 686 Pfam CASP C terminal 434 663 IPR012955 GO:0006891|GO:0030173
Lal25g0438 686 MobiDBLite consensus disorder prediction 53 70 - -
Lal25g0438 686 Coils Coil 508 542 - -
Lal25g0438 686 MobiDBLite consensus disorder prediction 461 502 - -
Lal25g0438 686 Coils Coil 78 105 - -
Lal25g0438 686 MobiDBLite consensus disorder prediction 48 70 - -
Lal25g0438 686 MobiDBLite consensus disorder prediction 461 478 - -
Lal25g0438 686 Coils Coil 418 459 - -
Lal25g0438 686 Coils Coil 306 362 - -
Lal25g0438 686 Coils Coil 46 66 - -
Lal25g0438 686 Coils Coil 126 191 - -
Lal25g0438 686 Coils Coil 194 242 - -
Lal25g0438 686 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 21 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0438 Lal-Chr25 2993146 3005133 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0438 K09313 - gmx:100780863 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0438 25 2993146 3005133 Lal25g0438 25 2993146 3005133 ECH