Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal25g0258 | ATGAAGGAAAGTGTAGGAAATCCTCTCCACCTAAAGTCTGTTAATCATATATCTCTCATATGTGCATCAGTGGAACAATCCATGAACTTCTACAAGAATGTTCTTGGATTTTTTCCTATCAGGAGGCCAGGATCATTTAATTTTGATGGTGCATGGCTATTTGGGTATGGGATTGGAATTCACTTGCTGCGTGTTGAGGACCCAGAAAACCTTTCAAAGAAGACAGAAATTAACCCCAAGGATAGTCATATATCATTTCAGTGTGAAAGTATGGGGGTAGTGGAGAATAAGCTAAAGGAAATGGAAATTGATTATGTACGTGCAATGGTAGAAGAAGGTGGAATTCAAGTGGATCAACTATTTTTCCATGACCCAGATGGCTTCATGATTGAGATATGCAATTGTGATAGCCTCCCTGTGATTCCATTAACTGGTGAAATTGTGAGATCATGTTCAAGACTTAACCTTCAAATGATGCAACAAAAGATACAACAAGTTGTTCATCAACTCTGA | 513 | 0.3821 | MKESVGNPLHLKSVNHISLICASVEQSMNFYKNVLGFFPIRRPGSFNFDGAWLFGYGIGIHLLRVEDPENLSKKTEINPKDSHISFQCESMGVVENKLKEMEIDYVRAMVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLTGEIVRSCSRLNLQMMQQKIQQVVHQL | 170 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal25g0258 | 170 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 14 | 132 | IPR004360 | - | |
| Lal25g0258 | 170 | CDD | VOC_like | 14 | 132 | - | - | |
| Lal25g0258 | 170 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 7 | 134 | IPR029068 | - | |
| Lal25g0258 | 170 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 13 | 135 | IPR037523 | - | |
| Lal25g0258 | 170 | PANTHER | BNAC05G11680D PROTEIN | 1 | 169 | - | - | |
| Lal25g0258 | 170 | Gene3D | - | 3 | 142 | IPR029068 | - | |
| Lal25g0258 | 170 | PANTHER | - | 1 | 169 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal25g0258 | Lal-Chr25 | 1758121 | 1759575 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal25g0258 | - | - | csv:101209593 | 293.123 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal25g0258 | 25 | 1758121 | 1759575 | Lal25g0258 | 25 | 1758121 | 1759575 | ECH | |
| Lal25g0258 | 25 | 1758121 | 1759575 | Lal10g1169 | 10 | 18293563 | 18295013 | LSH | |
| Lal25g0258 | 25 | 1758121 | 1759575 | Lal8g0212 | 8 | 1412697 | 1412921 | LSH | |
| Lal25g0258 | 25 | 1758121 | 1759575 | Lal1g1263 | 1 | 13929611 | 13932995 | PCT | |
| Lal1g1263 | 1 | 13929611 | 13932995 | Lal25g0258 | 25 | 1758121 | 1759575 | PCT |