Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0224 ATGGGAGAATTCAAGCACTTTGTTATTGTTAAGTTCAAGGAAGGTGTTGTAGTTGAAGAACTAACCAAAGGGATGGAGAAGTTGGTGACCGAAATCGAAGCTGTCAAGTCCTTCGAATGGGGACAGGACATTGAAAGCCTAGATATGCTGAGACAAGGATTTACTCATGCCTTTTTGATGACATTCAACAAGAAAGAAGACTTCAGTGCATTTCAGAGTCATCCAAATCATATCGAGTTTTCGGCAACATTTTCGCAAGCTATTGAGAAGATTGTGCTATTGGATTTCACATCTACTCTTGTCAAGGCACCAGCATGA 318 0.4057 MGEFKHFVIVKFKEGVVVEELTKGMEKLVTEIEAVKSFEWGQDIESLDMLRQGFTHAFLMTFNKKEDFSAFQSHPNHIEFSATFSQAIEKIVLLDFTSTLVKAPA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0224 105 Gene3D - 2 105 - -
Lal25g0224 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Lal25g0224 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Lal25g0224 105 PANTHER EXPRESSED PROTEIN 1 104 - -
Lal25g0224 105 PANTHER - 1 104 IPR044662 -
Lal25g0224 105 SMART Dabb_2 4 98 IPR013097 -
Lal25g0224 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0224 Lal-Chr25 1534996 1536446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0224 - - pvu:PHAVU_005G126400g 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0224 25 1534996 1536446 Lal25g0224 25 1534996 1536446 ECH
Lal25g0224 25 1534996 1536446 Lal2g0335 2 2035457 2036397 PCT
Lal25g0224 25 1534996 1536446 Lal9g0313 9 2026991 2032229 PCT
Lal2g0335 2 2035457 2036397 Lal25g0224 25 1534996 1536446 PCT
Lal9g0313 9 2026991 2032229 Lal25g0224 25 1534996 1536446 PCT