Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0219 ATGCCGAGTCCTAAGAACCACCACCATAGAAACAACAACATCGGAAGATTGGGTGAGAAATCTTCCTCCTTCCACGGCGAAAACGCCATGTCTGCCGCCCAACTCCGCCGTCCGAGGACTGTCCCGGACCTTCTCTCTTTCAGGAACATAAATACCAGAGCGGTGGTGCCGGATGGCTTGCCGAGACAACCGCCGAAGGTGCTGCTGAAGGTGACGGTGATCGGAAGTGTTGCGCCTGTTCAGGTGCTGATTAGGCCGGAATCCACCGTCGGAGATTTGGTGATGGCCGCTCTGCAGCAGTACGTGAAGGAAGGTCGCCGTCCAATCTTGCCTACCATGAATGCCAACAATTTCGACCTCCATTATTCTCAGTTTAGTTTAGAAAGTTTGGAAAGGGATGAGAAACTAATAGATCTTGGATCCAGAAACTTCTTCATGTGTCCAAGTAAGCCTTCCTCCGCCGTGGAAGGTGGTGGTGGTGGTGGTGGTGGTAGAGAAGGTAGCATGACAACACCGTTTGTATCTTGTGCAAACCAGGTCAGCAAAGTGAAGCAGGGTAGTGACCGTGATGCAGGCTTTGGTTGGTTCAAGTTAATGCATTTCTTGCTCCCATGA 615 0.5138 MPSPKNHHHRNNNIGRLGEKSSSFHGENAMSAAQLRRPRTVPDLLSFRNINTRAVVPDGLPRQPPKVLLKVTVIGSVAPVQVLIRPESTVGDLVMAALQQYVKEGRRPILPTMNANNFDLHYSQFSLESLERDEKLIDLGSRNFFMCPSKPSSAVEGGGGGGGGREGSMTTPFVSCANQVSKVKQGSDRDAGFGWFKLMHFLLP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0219 204 MobiDBLite consensus disorder prediction 1 35 - -
Lal25g0219 204 PANTHER EXPRESSED PROTEIN 7 201 - -
Lal25g0219 204 PANTHER BNAC05G50380D PROTEIN 7 201 IPR040358 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0219 Lal-Chr25 1504760 1506100 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0219 - - cam:101488804 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0219 25 1504760 1506100 Lal25g0219 25 1504760 1506100 ECH
Lal25g0219 25 1504760 1506100 Lal10g1198 10 18420444 18421332 LSH
Lal25g0219 25 1504760 1506100 Lal8g0176 8 1187970 1190249 LSH
Lal25g0219 25 1504760 1506100 Lal1g0418 1 2595926 2597174 PCT
Lal1g0418 1 2595926 2597174 Lal25g0219 25 1504760 1506100 PCT