Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0056 ATGTTACACCTTTTGTACTTTGTCATATTTGTTGAAATATTTGTGATTCTTAGCTTTATTTTCAAGACTCCTATGAGGAAAGTGGTGATCATAATGTTGGGTAAGGTGAAGAGAGGACGTGGACCTGTGGTGGTGAAGACGGTGGTGGTAACATTGGTGGTGGTGCTATGTTCAAGCTTCTATACCATGTTTAAGATAAAGAATCGTAGTACACTTCAGTTTGGTGTTGTTAACCCTACTGAACAAGTACTCATCTTTAAACATATCCTTGAAGCTTCTCTCTTGGGGTTTGTGTTGTTCCTCTCTTTAATGATAGATAGATTGCACTATTACATTAGAGAGCTTATGATACAAAGAAAGACCATGGGGGCTGCTAAGAAACAAAGTACAAATTTTGGTGATGGCAAAAATGCATTGAAAGAAGAGATTGTCACACTGAAACCCGAAGTTCAGAATCTAGAATCTGAATGTGAGGTGAAAGGAAACAAAGTTAAGGCTTTGGAAGCTGAATTAGAGGCTTTAAAAAAACAATCAGAGGGGTTTCTTATTAAATATGATAGACTCTTGGAAGATAATCAGAATCTTAGGATTCAGTTGGAGAGTGTTCACTAG 612 0.3709 MLHLLYFVIFVEIFVILSFIFKTPMRKVVIIMLGKVKRGRGPVVVKTVVVTLVVVLCSSFYTMFKIKNRSTLQFGVVNPTEQVLIFKHILEASLLGFVLFLSLMIDRLHYYIRELMIQRKTMGAAKKQSTNFGDGKNALKEEIVTLKPEVQNLESECEVKGNKVKALEAELEALKKQSEGFLIKYDRLLEDNQNLRIQLESVH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0056 203 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 202 IPR008417 GO:0005783|GO:0006886|GO:0016021
Lal25g0056 203 Coils Coil 136 184 - -
Lal25g0056 203 Gene3D - 132 195 - -
Lal25g0056 203 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0056 Lal-Chr25 408048 409302 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0056 K14009 - gmx:100798727 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0056 25 408048 409302 Lal1g0500 1 3198929 3208776 PCT
Lal25g0056 25 408048 409302 Lal2g0405 2 2430695 2433450 PCT
Lal1g0500 1 3198929 3208776 Lal25g0056 25 408048 409302 PCT
Lal2g0405 2 2430695 2433450 Lal25g0056 25 408048 409302 PCT