Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1211 ATGAAGAATAGAGCATGTAGAGTTTTGAAAGTGGTCATAGCTGATCTCAGGTCCATGGCTAAGTCAAAAACTATGGCTCTCAAGTCCAAAACAAATGCCATTAGAGCAAGGTTGATTATTTTATCACTTGTGATGAACAAGAAGTTTGTAGTAAGCTCTATTTCTCACAAGTTTCAATCTGTTCTGAGGCACCATTCTAACCCTAATGAAGAATGCTTATTGGAAGATAGAAGTAACAAAAACAAGGCCATGATGGTGTTCAATGAGATTAACAACAACAACACTATTGTGTCAAATCCTAGTGAAACTCAAAGGGTGGTAGAGGATAACGATCAAGATGGCTATGAAAGTTACTACAAGTATGAAGAAGATTATGATTATGGTGATGGTAAGTGCATGTACCTGGATTTAACACACACACTGTTTGAGTCAGAGAATTTGGATCTTGAAGGGTCTGTGAATGAGTTGGTGAAGAGTTCAAAGGAAGAGGAAGGTCAAGAGTTGAAAATGGAGGAAGATATTGACTATATGGCTGACCTTTTTATCAAGAAATTTCACAGGCAAATCATGTTGCAGAAGCAGGATTCTTTGAAGAGGTGCCATGGAATGTGTTGA 615 0.3772 MKNRACRVLKVVIADLRSMAKSKTMALKSKTNAIRARLIILSLVMNKKFVVSSISHKFQSVLRHHSNPNEECLLEDRSNKNKAMMVFNEINNNNTIVSNPSETQRVVEDNDQDGYESYYKYEEDYDYGDGKCMYLDLTHTLFESENLDLEGSVNELVKSSKEEEGQELKMEEDIDYMADLFIKKFHRQIMLQKQDSLKRCHGMC 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1211 204 PANTHER COTTON FIBER PROTEIN 1 202 - -
Lal24g1211 204 PANTHER EMB|CAB67623.1-RELATED 1 202 - -
Lal24g1211 204 Pfam Cotton fibre expressed protein 171 203 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1211 Lal-Chr24 13348993 13349607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1211 - - ccaj:109791419 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1211 24 13348993 13349607 Lal24g1211 24 13348993 13349607 ECH
Lal8g1094 8 9058725 9059339 Lal24g1211 24 13348993 13349607 PCT
Lal24g1211 24 13348993 13349607 Lal8g1094 8 9058725 9059339 PCT