Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0203 ATGGCGGCAATTACGGTGTGGCAGCCACAGGAGGAAGGTTTCAAGGAGATCTGTGGCCTCCTTGAGCAGCAGATTTCTCATCTTTCTTCCTCTGATAAGTCTCAGATTTGGAACCACCTTCAGAATTATTCTCACCTCCCTGACTTCAATAATTACCTCGCTTTTATTTTCTCCCGTGCCGAGGGAAAATCAGTGGAGGTTCGGCAGGCTGCTGGTCTTTATCTGAAGAATAACCTTAGAAACACATATAAAACTATGCTGCCTGCATACCAACAATATGTGAAATCAGAATTGCTGCCTTGTCTTGGTGCCGTGGATAAGCATATAAGGTCTACGGCGGGCACTATTATCAGTGTTGTTGTTCAAATAGAAGGAATTGTTGGGTGGCCTGAATTGTTGCAAGCCCTTGTAAATTGCTTGGACAGTAATGATCTAAATCACATGGAAGGTGGAATGGATGCATTATCCAAGATTTGTGAGGATATTCCCCAATTGCTCGACTCTGATGTACCTGGGTTAGCAGAGCGCCCTATAAACATTTTTCTCCCCAGATTATTTCGGTTTTTCCAATCTCCTCATGCTTCATTAAGAAGGCTATCACTGGGTTCTGTAAATCAATACATTATGTTAATGCCTTCTGCCCTATACTTATCCATGGACCAATATCTTCAAGGTCTGTTTATTCTTGCAAACGACACTAATGCCGAAGTGCGGAAATTGGTTTGCGCAGCATTCGTTCAGCTAATTGAAGTCCGCCCATCTTTCTTAGAGCCACACCTAAGGAATGTGATCGAATACATGTTACAAGTCAACAAGGACACAGATGAGGAAGTGGCTCTTGAAGCCTGTGAATTTTGGTCCGCGTATTGTGATGCTCAACTGCCACCTGAAAACTTGAGAGAGTTCTTGCCTCGTCTGATTCCAGTATTATTGTCAAACATGGCATATGCAGATGATGACGAATCTGTTATTGAAGCTGAGGAAGATGGTTCCGAACCTGATCGTGATCAGGATCTTAAACCTCGATTTCATGTATCAAGGTTTCATGGATCGGATGAAGTAGAAGATGAAGATGATGATGTTGTTAACACATGGAATTTACGGAAATGCAGTGCCGCTGCTGTAGATGTTCTCTCAAATGTTTTTGGGGATGAGATCCTTCCTACTCTTATGCCTATTGTTGAGGTCAAGTTGGTAGCCACTGGCGATGAAGCTTGGAAAGACAGGGAAGCTGCTGTCTTGGCTCTTGGTGCCATAGGGGAGGGTTGCATTAATGGCCTTTATCCTCATTTGCCAGAGATTGTGGCGTTTCTCATTCCTCTTCTTGATGATAAGTTTCCACTGATACGAAGTATTGCATGCTGGACACTCTCTCGCTTTAGCAAATTTATTATTCAGGGTATTGGGCATCCAAAAGGCTATGAACAATTTGATAACGTTCTTATGGGTCTTCTACGAAGAATTTTGGATGATAACAAGCGGGTGCAAGAGGCTGCTTGTTCTGCCTTTGCAACATTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGCTTGGAAATTATACTAAAACACTTGATAATTGCATTCGGGAAATATCAGAGACGCAATCTCAGGATTGTATATGATGCTATTGGAACTCTAGCTGAAGCTGTTGGAGGGGAGCTTAATCGGCCTGGATGTCTTGACATTCTCATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTTCTGGAATGCTTTACATCTATAGCACATGCATTGGGTACTGGATTCTCTCAATTTGCTGAACCAGTATTTAGGAGGTGCATAGATATAATACAGACCCAACAGTTTGCAAAGGTTGATCCAGTTGCTGCTGGGGCACAATATGACAAGGAATTCATTGTATGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGTCTTGGGAGTGGAGTAGAAAGCTTGGTTTCACAAAGTTCTTTGAGGGACCTACTTCTGCATTGCTGTGTGGATAAAGCTCCTGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTTGCACGAGTGTGCCCGATTCATTTGCACCCTCGTTTGTCGGAGTTTCTGGAGGCTGCAGCCAAGCAGCTGGAAATTTCTAAGGTAAAGGAGGCAATTTCAGTTGCAAATAACGCATGCTGGGCTATTGGAGAATTGGCAGTTAAGGTTCGTCGGGAAATTTCTCCTGTTATTTTAACTGTGATTTCATGCCTGGTCCCAATTCTTCAGCATGCAAAGGAACTCAACAAGTCACTTATAGAAAATAGTGCAATAACTCTGGGGAGGCTTGCATGGGTCTGTCCAGAACTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTTTGTCGATGATAAGAGATGATGTTGAGAAAGAGGATGCTTTTAGAGGTCTTTGTGCTATGGTCAAAGCTAATCCTTCTGGAGCTCTAAGTTCACTTGTGTATATGTGCAATGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGATGTCTGCCAGGTCTTGAATGGATATAAACAGATGCTGGGAAATGGAGCGTGGGACCAATGTATGTCTGCTTTGGAGGCCCCAATAAAAGAAAAGCTTTCAAAATATCAAGTATAA 2676 0.4312 MAAITVWQPQEEGFKEICGLLEQQISHLSSSDKSQIWNHLQNYSHLPDFNNYLAFIFSRAEGKSVEVRQAAGLYLKNNLRNTYKTMLPAYQQYVKSELLPCLGAVDKHIRSTAGTIISVVVQIEGIVGWPELLQALVNCLDSNDLNHMEGGMDALSKICEDIPQLLDSDVPGLAERPINIFLPRLFRFFQSPHASLRRLSLGSVNQYIMLMPSALYLSMDQYLQGLFILANDTNAEVRKLVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDEEVALEACEFWSAYCDAQLPPENLREFLPRLIPVLLSNMAYADDDESVIEAEEDGSEPDRDQDLKPRFHVSRFHGSDEVEDEDDDVVNTWNLRKCSAAAVDVLSNVFGDEILPTLMPIVEVKLVATGDEAWKDREAAVLALGAIGEGCINGLYPHLPEIVAFLIPLLDDKFPLIRSIACWTLSRFSKFIIQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLIIAFGKYQRRNLRIVYDAIGTLAEAVGGELNRPGCLDILMPPLIEKWQQLSNSDKDLFPLLECFTSIAHALGTGFSQFAEPVFRRCIDIIQTQQFAKVDPVAAGAQYDKEFIVCSLDLLSGLAEGLGSGVESLVSQSSLRDLLLHCCVDKAPDVRQSAFALLGDLARVCPIHLHPRLSEFLEAAAKQLEISKVKEAISVANNACWAIGELAVKVRREISPVILTVISCLVPILQHAKELNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVYMCNAIASWHEIRSEDLHNDVCQVLNGYKQMLGNGAWDQCMSALEAPIKEKLSKYQV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0203 891 Gene3D - 4 891 IPR011989 -
Lal24g0203 891 ProSiteProfiles Importin-beta N-terminal domain profile. 36 104 IPR001494 GO:0006886|GO:0031267
Lal24g0203 891 SUPERFAMILY ARM repeat 7 879 IPR016024 -
Lal24g0203 891 Pfam HEAT-like repeat 406 459 - -
Lal24g0203 891 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Lal24g0203 891 Pfam HEAT repeat 666 694 IPR000357 GO:0005515
Lal24g0203 891 SMART IBN_N_2 36 104 IPR001494 GO:0006886|GO:0031267
Lal24g0203 891 PANTHER TRANSPORTIN 1 ISOFORM 1 7 889 - -
Lal24g0203 891 PANTHER IMPORTIN BETA 7 889 IPR040122 GO:0006606
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0203 Lal-Chr24 1475343 1491571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0203 K18752 - gmx:100792702 1627.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0203 24 1475343 1491571 Lal24g0203 24 1475343 1491571 ECH