Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0103 ATGGGTGAGAGAAGAAAGAAGCATCGTCGCCATCTTCAAGACTCATCTTCCTCCACCGACTCCGACTCCGACTCCGATTCCGATTCCCACTCTTCCATGAAGCGGCGCCATCGCCGGGAAAAGGAGCGGCACAGAAGGAGTGATGGGAAGGATAGCAGGAAAAGGGAAAAAGAGGAGAAAAGGAAGAGGAGAAGAGACAGAGACAGCAAATCGAAGAAAAGGAAGAAGAGACTCTCCGATTCTGATGAAGAAGGAGATTTCTCTGAGGAAGACAGATTTAGGGTTCAACCTCAAACTGTCCTCCGCCAATTGATGACGGAGTTTCCAAATGCTGGCAACGACTTGAAGCTGCTTTTGCAAATGATTGATGATGGACAAGCTGTTGACATAAAGGGTATATCAGAAAGATCTCTCATGAAACATCTAAAGAAGCTGTTCCTTTCCTTAAATCTTAAGGAAAATGGAGATAGAGTTTTCTTACTTCCTTCTGAAGCTAGCCCGACTTTGGATGTTGTCGGTCCTCTCATTCACTCTTATATAGGTCCTGAAAAGGTGCAAGGTGACCCTTCTGCACCAGTGCCTGAAATATGTCCAGTTCCAAAAGATATGGGAAGTGAGCAGATAACGGATGACCATATGACAAAAACTTTAGAGGATAATTCTGTTGGTCCTAGAAGAAGAGTAATTGGCCCTGCAATGCCATCAGCTGAATTACTTGCTGCTGCTGCCAAATTAACAGAGGCACAGACTGAGCTCAAAGAAGCTGAATTGGATGACGATACTGAACTATTTATTGGACCTGCACCACCTGCTATGGTTTTTGAAGCAGAATCAGCTAATGAAGCAGAACGTTTTGAAGAGGTCACCAGGATCATGGAAGTTGAGGCTGAAAGCCCATATGATGTTCTCGGAGTTAACCATAATATGTCCAACGATAACATCAAGAAAAGGTACTGGAAGAAATCACTTTTGGTTCATCCAGATAAATGCTCCCATCCACAAGCCCACCAAGCATTTATTAAGTTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGATAAAATCAAACTCAAGCAAGAACAGGAAGAAATGAAGGCGGAACTTAAAGTAATGCGTGAAGCTGCATTGTGGAGAAGATCACAAGGCATATCAATGGATGGTGATGATGTGCTACTGGCAGAGACAGAGGTTAAAGTGGAGCCAAAAAGAGATGAATGGATGACAACACTGCCTCCAGAGAGAAGACCTGGTGGTGTGACTATGCAATCAACCACGTTTAGCCGGGGTTCAAAGGAAGGTCGAGGTGATACTAGTGCTTGGACAGATACCCCTTCTGATAGAGCCCAGAAAGCGAAGATGAATTACTTAGAAGCATACAACGAGGCTTCGGCGCTTGCCTCAAATGAAGAGGAAAACAAAAGAGCTGGTGCTGATGCAGATTTGGTGGATAAATACAATAAAGCAAAACGATCGAAAACATTGGTGCAAAAGCATCAAGAAGATGCTGCTAGCAAATCGAAGAAAAAATCCAAACAACAGTCGGAGAAGGAAGAATGGTTGGGTCAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTAACAGCTGGGAGGAAAAGTGTAAAATTTGATTCAAACAGCATGTCTGATGGTTTATCTTCAAGGTTTTCTTCTGGAAACTTCCAGAGGAATTTCCTTTGA 1722 0.4338 MGERRKKHRRHLQDSSSSTDSDSDSDSDSHSSMKRRHRREKERHRRSDGKDSRKREKEEKRKRRRDRDSKSKKRKKRLSDSDEEGDFSEEDRFRVQPQTVLRQLMTEFPNAGNDLKLLLQMIDDGQAVDIKGISERSLMKHLKKLFLSLNLKENGDRVFLLPSEASPTLDVVGPLIHSYIGPEKVQGDPSAPVPEICPVPKDMGSEQITDDHMTKTLEDNSVGPRRRVIGPAMPSAELLAAAAKLTEAQTELKEAELDDDTELFIGPAPPAMVFEAESANEAERFEEVTRIMEVEAESPYDVLGVNHNMSNDNIKKRYWKKSLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDDKIKLKQEQEEMKAELKVMREAALWRRSQGISMDGDDVLLAETEVKVEPKRDEWMTTLPPERRPGGVTMQSTTFSRGSKEGRGDTSAWTDTPSDRAQKAKMNYLEAYNEASALASNEEENKRAGADADLVDKYNKAKRSKTLVQKHQEDAASKSKKKSKQQSEKEEWLGQHPWKPWDREKDLTAGRKSVKFDSNSMSDGLSSRFSSGNFQRNFL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0103 573 Coils Coil 238 258 - -
Lal24g0103 573 Coils Coil 354 381 - -
Lal24g0103 573 MobiDBLite consensus disorder prediction 495 573 - -
Lal24g0103 573 MobiDBLite consensus disorder prediction 44 65 - -
Lal24g0103 573 MobiDBLite consensus disorder prediction 495 546 - -
Lal24g0103 573 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 573 - -
Lal24g0103 573 MobiDBLite consensus disorder prediction 415 454 - -
Lal24g0103 573 Pfam Protein of unknown function (DUF3752) 418 564 IPR022226 -
Lal24g0103 573 MobiDBLite consensus disorder prediction 13 35 - -
Lal24g0103 573 SUPERFAMILY Chaperone J-domain 277 356 IPR036869 -
Lal24g0103 573 SMART dnaj_3 297 354 IPR001623 -
Lal24g0103 573 MobiDBLite consensus disorder prediction 425 454 - -
Lal24g0103 573 MobiDBLite consensus disorder prediction 73 91 - -
Lal24g0103 573 ProSiteProfiles dnaJ domain profile. 298 363 IPR001623 -
Lal24g0103 573 CDD DnaJ 299 351 IPR001623 -
Lal24g0103 573 Pfam DnaJ domain 299 359 IPR001623 -
Lal24g0103 573 MobiDBLite consensus disorder prediction 1 91 - -
Lal24g0103 573 PRINTS DnaJ domain signature 300 318 IPR001623 -
Lal24g0103 573 PRINTS DnaJ domain signature 318 333 IPR001623 -
Lal24g0103 573 PRINTS DnaJ domain signature 334 354 IPR001623 -
Lal24g0103 573 Gene3D DnaJ domain 282 382 IPR036869 -
Lal24g0103 573 MobiDBLite consensus disorder prediction 547 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0103 Lal-Chr24 700521 706863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0103 - - aip:107618276 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0103 24 700521 706863 Lal24g0103 24 700521 706863 ECH