Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0075 ATGGAGGTTGAGTTGGGGCTCAAGATTACGAGAACCAGAGATGATACAACTTCCATTTCTGATTTTCAATTTGCAAAAGACAGATCAGGACCTCTCTTCTTCTCTGAAGAAACTGATGCAATGTTTATCCTCACTGCACATCTTAAAGGATATAAGAAAGAGAACATTGACATAAATATTAGTGAAGATGGTAGTGAGATTTCAGTGAGCGGGGAGAAAGAGGTGCAGGAAATGCAAATGATACCGTTCAAGAAAGAGCTGAAAATGAAAGGTTTTAGAAAGAAGTTTAGAATCCCTGATGGGGTTATTTTGGATAGGATCAAGGCTAAGAAGTATAAAGAAGAGGATGGTGTTTTGACAATTGTGATGCCAAAAATGGTGAAAGGGATGTGTAGTATTGGAATTGAGGAAGTGAAGGAATTAGAAGAGGTTGTTGATAGAGTGACACCAGAACCAGAAGATAAGAAGGAAGAGGAAGCAGCTCCACCAGTGAAGAAGCGAGGTCCCAAAAAACCATGGAAGCCCTGTCCTCCTTTGTTTCTAGGAGGATCAACTTTGCTTGTGTCTCTTATCTTTCTAGTAATACACTATATTAGAGTGAGAAAGAGTAGTTGA 615 0.3935 MEVELGLKITRTRDDTTSISDFQFAKDRSGPLFFSEETDAMFILTAHLKGYKKENIDINISEDGSEISVSGEKEVQEMQMIPFKKELKMKGFRKKFRIPDGVILDRIKAKKYKEEDGVLTIVMPKMVKGMCSIGIEEVKELEEVVDRVTPEPEDKKEEEAAPPVKKRGPKKPWKPCPPLFLGGSTLLVSLIFLVIHYIRVRKSS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0075 204 SUPERFAMILY HSP20-like chaperones 31 126 IPR008978 -
Lal24g0075 204 Pfam Hsp20/alpha crystallin family 37 127 IPR002068 -
Lal24g0075 204 MobiDBLite consensus disorder prediction 146 172 - -
Lal24g0075 204 CDD ACD_sHsps-like 37 125 - -
Lal24g0075 204 MobiDBLite consensus disorder prediction 146 166 - -
Lal24g0075 204 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 144 IPR002068 -
Lal24g0075 204 PANTHER HEAT SHOCK PROTEIN 26 168 201 IPR045045 -
Lal24g0075 204 PANTHER HEAT SHOCK PROTEIN 26 1 163 IPR045045 -
Lal24g0075 204 Gene3D - 9 135 IPR008978 -
Lal24g0075 204 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 168 201 - -
Lal24g0075 204 PANTHER HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0075 Lal-Chr24 485371 486213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0075 - - aprc:113873754 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0075 24 485371 486213 Lal24g0075 24 485371 486213 ECH
Lal9g0871 9 6521771 6528376 Lal24g0075 24 485371 486213 PCT
Lal24g0075 24 485371 486213 Lal9g0871 9 6521771 6528376 PCT