Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0047 ATGGAGTCCCTTTGGAAACTTTCATATTTGCTGGAGCCTGCGCCCGTCACACTTATCACTACTGCTGTAGCTGTGACATTTGGATCTGCATTCCGCGCTCTAAATTATGGGAAAGAGATGGAGCGTAATCTTGACTTTTCAGAAGCATCCATTACGTTGGATAGGTCCCAAGCATTAATGATCCCCGTGATGAGCTCTTTTAGCTTGCTTTTGATGTTCTACCTGTTCTCATCTGTCTCACAGATTCTCACGGCATTCACTGCCATTGCTTCTGTATCATCCCTTTTCTTCTGCTTCTCTCCTTATGTTGCCTATATGAAGTCACAATTTGGTTTAGCCGATCCTTATGTTTCACGTTGTTGCTCAAAATCTTTTACTCGGACCCAAGGAGTGCTATTGTTAGCCTGCATTGTCACAGTGGCTGCTTGGCTTGTTTCTGGTCATTGGATACTGAACAATTTATTAGGCATATCTATATGCATCGCGTTCGTAAGCCATGTGCGTCTTCCAAATATCAAGATTTGTGCAATGCTCCTTCTTTGTCTATTTGTATATGACATTTTCTGGGTTTTCTTCTCTGAAAGATTTTTTGGGGCAAATGTCATGGTATCAGTGGCAACACAGCAAGCATCAAATCCTGTGCACACTGTTGCTAATAGTTTAAGTCTTCCTGGGTTACAACATATAACAAGGAAATTGGAGTTGCCTGTAAAGATTGTTTTTCCGAGAAATTTGTTGGGCGGCACTGTTCCTGGAGAAAATGTGAGAGAATTCATGATGCTTGGTTTAGGCGACATGGCTATCCCAAGCATGCTGCTGGCTTTGGTCCTCTGCTTTGATTATCGAAAAAGCAAAGATACAATAAATCTCTTTGAATTACACTCCTCAAAGGGGCACAAATACATATGGTATGCACTACCTGGGTATGCTGTGGGCCTGGTAACTGCTTTGGCAGCTGGTGTCTTGACTAGTTCACCTCAACCTGCACTTCTTTATCTGGTGCCTTCTACTCTGGGACCTGTAATTGTGGCCTCATGGATAAAAAAGGAGCTACTGGAGTTGTGGGAAGGAAGCATCCCAAATCTCAATGATAAAGATCGTGAAATACAAATTTAG 1116 0.4247 MESLWKLSYLLEPAPVTLITTAVAVTFGSAFRALNYGKEMERNLDFSEASITLDRSQALMIPVMSSFSLLLMFYLFSSVSQILTAFTAIASVSSLFFCFSPYVAYMKSQFGLADPYVSRCCSKSFTRTQGVLLLACIVTVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLLCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQHITRKLELPVKIVFPRNLLGGTVPGENVREFMMLGLGDMAIPSMLLALVLCFDYRKSKDTINLFELHSSKGHKYIWYALPGYAVGLVTALAAGVLTSSPQPALLYLVPSTLGPVIVASWIKKELLELWEGSIPNLNDKDREIQI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0047 371 PANTHER SIGNAL PEPTIDE PEPTIDASE 4 359 IPR007369 GO:0004190|GO:0016021
Lal24g0047 371 Pfam Signal peptide peptidase 50 358 IPR007369 GO:0004190|GO:0016021
Lal24g0047 371 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 3 4 359 - -
Lal24g0047 371 SMART psh_8 49 348 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0047 Lal-Chr24 298973 302256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0047 K09598 - gmx:100794976 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0043 13 296002 299053 Lal24g0047 24 298973 302256 LSH