Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1559 ATGAAGAGAATGGGTCTGAGATTGATTGCATTGAACAGAATATTGGGATTGTTGATACATTGTTGGTTGTTCTTATTAGAATCAAAAGCATCTCTTTTTACTTTAAAAGATGATAGTGAGAATAGTAGTAGTAGTAGTAGTTCTATTGCACTAGTACCTGCATTGTTCGTGATGGGAGATTCTTCTGTTGATTGTGGAACTAACAATTATCTTCCCACATTTGCACGCGCCAACCACCTTCCTTATGGCAGAGATTTCGATACTCATCAACCCACTGGTAGATTCTCCAATGGCAGAATCCCTGTTGATTTTCTTGCACTTCGTCTTGGGATTCCTTTTGTGCCGAGTTATCTGGGGCAAACAGGAAATGTGAAGGACATGATTCATGGTGTCAATTACGCTTCTGCTGCTGCTGGCATTATTCTCTCAACCGGCTCCGAATTGGGTCAGCATATCTCCTTTACTCAGCAAATTCAGCAATTTACTGACACCTTTCAACAGTTCATATTAACAATGGGAGAGAATGCTGCAACCACTCTCATTGCCAACTCTGTCTTTTATATTTCTATCGGAATCAACGACTACATTCATTACTACTTGCTCAATGTGTCCAACGTCGATAATTTGTACCTACCATGGACCTTCAACCAGCTTTTGGCTTCTTCACTCAGCCAAGAAATTAAGAACTTGTACAATATAAATGTTAGGAAAATTGTGGTTTCGGGGCTTGCCCCCATTGGCTGTGCTCCTAACTACTTATGGCAGTATGGTAGTGTAAATGGAGAGTGTGTTGAGCAGATAAATGACATGGCCATTGAATTCAACTTTCTCATGAGGTACAAGATTGACAAGCTTGCTATGGAGCTCCCTGGTGCCAATATCATCTTCTGTGACGTGTTCGAAGGTTCAATGGATATTTTGAAGAATCATGAACTCTATGGCTTTAATATTACTACAGAAGCCTGCTGTGGAGTTGGAAAATACAATGGGTGGATTATGTGCTTATCAGCAGAAATGGCATGTAATAATGCTTCTAATCATATCTGGTGGGACCAGTTCCATCCAACTGATGCAGTGAATTCAATTTTAGCAGACAATATTTGGAACGGTAGGCACACTAAAATGTGCCATCCTATGAACTTGGAGGACATGGTAAATCAAAAGCCAAAATGA 1173 0.4024 MKRMGLRLIALNRILGLLIHCWLFLLESKASLFTLKDDSENSSSSSSSIALVPALFVMGDSSVDCGTNNYLPTFARANHLPYGRDFDTHQPTGRFSNGRIPVDFLALRLGIPFVPSYLGQTGNVKDMIHGVNYASAAAGIILSTGSELGQHISFTQQIQQFTDTFQQFILTMGENAATTLIANSVFYISIGINDYIHYYLLNVSNVDNLYLPWTFNQLLASSLSQEIKNLYNINVRKIVVSGLAPIGCAPNYLWQYGSVNGECVEQINDMAIEFNFLMRYKIDKLAMELPGANIIFCDVFEGSMDILKNHELYGFNITTEACCGVGKYNGWIMCLSAEMACNNASNHIWWDQFHPTDAVNSILADNIWNGRHTKMCHPMNLEDMVNQKPK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1559 390 PANTHER OS02G0290900 PROTEIN 44 386 - -
Lal23g1559 390 SUPERFAMILY SGNH hydrolase 183 369 - -
Lal23g1559 390 CDD SGNH_plant_lipase_like 53 371 IPR035669 -
Lal23g1559 390 Pfam GDSL-like Lipase/Acylhydrolase 55 366 IPR001087 GO:0016788
Lal23g1559 390 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 44 386 - -
Lal23g1559 390 Gene3D SGNH hydrolase 42 373 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1559 Lal-Chr23 15645635 15647867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1559 41 386 Acyl Lipid Metabolism Gene Families AT4G10950 68.497 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1559 - - gmx:100788021 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1559 23 15645635 15647867 Lal23g1559 23 15645635 15647867 ECH