Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1554 ATGGCAGAGAAGAGATTCATCATCGAAGTTGAGAAAGCTAAAGAAGGTAGTGATGGTAAACCATCTATGGGACCAGTTTATCGTAGTCTCTTCGCCAAAGATGGTTTCCCTCCTCCTATTCAAGGTCTCGATTCTTGTTGGGACGTTTTTAGATTATCCGTTGAGAAATACCCGACAAATCCAATGCTTGGTCGCCGTGAAATTGTGGATGGGAAGCCTGGCAAGTACATCTGGCAGAGTTACAAGGAAGTATATGACCTGGTGGTGAAAGTTGGGAATTCTATCCGCAGTTGTGGTTATGAACAAGGTGTAAAATGTGGTATTTATGGCGCCAATTCTGCAGAGTGGATTATAAGCATGGAGGCCTGTAATGCTCATGGACTTTACTGTGTTCCTTTATATGATACCTTAGGTGCTGGGGCAGTAGAGTTTATTATATCCCATGCAGAGATCTCAATTGCATTTGCAGAAGAAAAGAAGATACCTGAGTTATTGAAGACATTTCCAAATGCTGCAAAGCATCTCCGGACACTTGTGAGTTTTGGAAAGGTTACCCCGGAACAAAAGCAAGACGTTGAAAAATATGGGTTGACAATATATTCATGGGATGATTTTTTACTATTGGGTCAACATCAGAGTTTTGATCTTCCTGTGAAGAAAAGGAGCGACATTTGTACAATAATGTATACTAGTGGAACTACCGGTGACCCCAAGGGTGTCTTAATATCCAATGACAGTATTATTACACTCTTAGCTGGGATAAAGCGACTGTTGGAGAGTGTCAATGAAGAATTGGAGGTGAAGGACGTATACCTATCATACCTTCCTCTTGCACATATCTTTGATAGAGTCATTGAGGAGGCATTTATTTGGCACGGTGCCTCAATAGGTTTCTGGCGAGGGGATGTCAAATTGTTAATTGAAGACATTGGAGAGCTAAAACCAACTATTTTCTGTGCTGTTCCCCGTGTGCTTGATAGGGTGTACTCAGGTTTGGTACAGAAGATTTCTGCTGGGGGCTTCCTAAAACAAACATTATTCAACTTTGCTCACTCATTTAAGTTGAATAACATGAAGAAAGGGCATCCTCATGCAGAGGCATCTCCATTTTTTGACAAACTTGTGTTTGATAAGGTAAAACAAGGATTAGGGGGTAAGGTTCGCCTTATTTTATCTGGAGCAGCACCTCTATCTACACATGTGGAAGCTTACTTAAGGGTGGTGACTTGTTCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACCTTTGTCTCCCTACCAAATGAACTGGACATGCTTGGAACAGTGGGCCCTCCTGTACCAAATGTGGATGTCTGCCTTGAATCTGTTCCTGAAATGGGATACAATGCCCTTGCTAGCACACCAAGAGGAGAAATCTGTGTAAGGGGAAGTACCTTGTTCTCAGGTTACTACAAACGTGAAGACCTCACAAAAGAGGTTTTGATTGATGGATGGTTCCATACAGGAGATATTGGAGAATGGCAACCTAATGGAAGTATGAAAATTATTGATCGGAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGATCAAGTTTCTTCTATTGAATCTGTATGTCCTAAGAACCCTTTCAATGGTTTTGCCATCCTAGCGTGTGGTGAATTTTTTGCCTGTAGTAAGTTTGAAAAATATATGATATGGGTTTATGGAAACAGTTTCGAGGCCTTCCTTGTTGCTGTTGCTAACCCCAGGAAGGAAGCACTTGAACGTTGGGCCGAAGAAAATGGTATAAGCATGGACTTCAGTTCACTCTGTGAAGATTCTAGAGCAAAAAAATACATACTTGAAGAGCTTTCAAAGACTGCAAAGGAAAATAAGTTGAAAGGTTTTGAGGTTATAAAAGCAATTCATCTTGACCCGGTTCCTTTTGATATGGAACGTGACCTTATCACTCCAACATATAAGAAGAAGAGGCCTCAATTGCTTAAATACTACCAGAATGTCATTGACAACATGTACAAGAGTGGAAGCAAACCCAATGCCTGA 2073 0.4096 MAEKRFIIEVEKAKEGSDGKPSMGPVYRSLFAKDGFPPPIQGLDSCWDVFRLSVEKYPTNPMLGRREIVDGKPGKYIWQSYKEVYDLVVKVGNSIRSCGYEQGVKCGIYGANSAEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHAEISIAFAEEKKIPELLKTFPNAAKHLRTLVSFGKVTPEQKQDVEKYGLTIYSWDDFLLLGQHQSFDLPVKKRSDICTIMYTSGTTGDPKGVLISNDSIITLLAGIKRLLESVNEELEVKDVYLSYLPLAHIFDRVIEEAFIWHGASIGFWRGDVKLLIEDIGELKPTIFCAVPRVLDRVYSGLVQKISAGGFLKQTLFNFAHSFKLNNMKKGHPHAEASPFFDKLVFDKVKQGLGGKVRLILSGAAPLSTHVEAYLRVVTCSHVLQGYGLTETCAGTFVSLPNELDMLGTVGPPVPNVDVCLESVPEMGYNALASTPRGEICVRGSTLFSGYYKREDLTKEVLIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYDQVSSIESVCPKNPFNGFAILACGEFFACSKFEKYMIWVYGNSFEAFLVAVANPRKEALERWAEENGISMDFSSLCEDSRAKKYILEELSKTAKENKLKGFEVIKAIHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDNMYKSGSKPNA 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1554 690 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Lal23g1554 690 SUPERFAMILY Acetyl-CoA synthetase-like 43 684 - -
Lal23g1554 690 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 556 - -
Lal23g1554 690 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 574 685 - -
Lal23g1554 690 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 556 - -
Lal23g1554 690 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 574 685 - -
Lal23g1554 690 Pfam AMP-binding enzyme 66 524 IPR000873 -
Lal23g1554 690 CDD LC-FACS_euk 74 683 IPR045311 GO:0004467|GO:0006631
Lal23g1554 690 Gene3D - 43 516 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1554 Lal-Chr23 15618546 15626651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1554 3 684 Acyl Lipid Metabolism Gene Families AT4G23850 73.167 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1554 K01897 - gmx:100814965 1192.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1554 23 15618546 15626651 Lal23g1554 23 15618546 15626651 ECH