Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1551 ATGTCTTCGTGGAAAGACGCAGACCCTAACCTGGGGTACCTTACCCGTAAGGACACGGAGGTGAAGCTTCCACGAGCAACTAGGGTTAAAAACAAAACCCCCGCTCCTGTTCAAATCACCGCCGAGCAGATTCTACGCGAGGCTCGTGAGCGTCAAGAAGCTGAGATCCGCCCTCCCAAACAGAAGATCACTGATCCAACCGAACTCGGGGAGTATCGTCTCCGTAAACGAAAGGAATTCGAAGACTTAATCCGCCGTGTTCGATGGAACATAGGGGTTTGGATCAAGTATGCTCGGTGGGAAGAGTCGCAGAAGGATTTCAAACGCGCTCGATCCATTTGGGAACGAGCGCTTGAGGTTGATTATAAGAATCATACCTTATGGCTTCAATATGCTGAGGTGGAGATGAAGAATAAGTTCATTAATCATGCTAGGAATGTATGGGACCGTGCGGTTACGCTATTGCCCAGAATTGATCAGTTATGGTATAAGTACATTCATATGGAGGAGATGTTAGGCAATGTGGCCGGTGCGAGGCAAGTTTTCGAGAGATGGATGAAGTGGATGCCTGATCAACAGGGTTGGTTGTCTTACATTAAGTTTGAACTTAGGTACAATGAGGTCGAACGTGCTAGAGGAATTTTTGAGAGATTTGTGCAATGCCATCCTCGTGTTGGCGCTTGGATTCGGTATGCTAAGTTTGAGATGAAGAATGGTGAGGTTGTGAGGGCGAGGAATGTTTATGAGAAAGCATTGGAAAAGCTCGCAGATGACGAGGAAGCAGAGCTGTTATTTGTTGCTTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACGGAGCGCGCAAGAGCTATATATAAATTTGCGCTTGATCATATTCCCAAGGGAAGGGCAGAAGATTTGTATCGCAAGTTTGTAGCGTTTGAGAAACAGTATGGGGACAGGGAAGGGATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTGGGAAAAAGTCCAACGAATTATGATTCGTGGTTTGATTATATAAGATTGGAAGAGAGTGTGGGGAATAAAGAAAGAGTAAGGGAAGTTTATGAGAGAGCTATAGCCAATGTTCCTCCGGCTCAGGAGAAGCGGTTATGGCAGCGCTATATCTATTTGTGGATTAATTATGCACTTTATGAAGAGCTTGATGCTGGAGATGTGGGACGAACCAGAGATGTATACAGGGAATGTCTCAATCTGATACCTCACCAGAAGTTCTCATTTGCGAAAATATGGCTACTGGCAGCCCAATTTGAAATACGGCAGCTGAATCTCAAGGCTGCCCGTCAAATATTAGGAAATGCCATTGGGCAGGCTCCAAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGTAGAAAACTGTATGAAAAGTATCTGGAGTGGTCGCCTGAAAATTGCTATGCCTGGAGCAAGTATGCAGAACTAGAGAGATCTTTAGCTGAAACCGATCGAGCTAGAGCAATATTTGAAGTAGCAATCGCCCAACCAGCATTGGACATGCCTGAGCTACTGTGGAAGGCATACATTGACTTTGAGACTGGCGAGGGTGAATTTGATAATGCAAGAGCACTTTATCAAAGGCTTCTTGATCGAACAAAGCACTTGAAGGTATGGATGAGCTATGCAGAGTTTGAGGCAACAGCTATTAAGGATGATTTAGACGAAACAGAAGAAGCACTAGAACAAAAGAAGCAATGCATTCAGCGTGCCAGAAGTATGTTGAATTGGAATAATTTTCTGATTCTCTTTATGTTTTGGTTTGTGCCTGCATCAGGGGTGTTTGAGGAAGCTCTCAATTACTTTAGATCGTCAGCTTCAGATTTGAAAGAGGAAAGAGCAATGCTGTTGGAGAAATGGCTCAACATGGAGACGACTGCGTTTGGGGAGCTGGGTGATGTTAGCTTAGTCCAGTCTAAGCTGCCCAAGAAGCTCAAGAAGAGAAGGCATGTTACTACTGAAGATGGTTCTACTAGAATTGAAGAATACATCGACTATTTATTCCCTGACGAAACTCAGACAACAAATCTCAAGATCTTGGAAGCTGCTTACAAGTGGAAGAAGCAAAAATTGTCTTCTGGTGATGATTAA 2157 0.4386 MSSWKDADPNLGYLTRKDTEVKLPRATRVKNKTPAPVQITAEQILREARERQEAEIRPPKQKITDPTELGEYRLRKRKEFEDLIRRVRWNIGVWIKYARWEESQKDFKRARSIWERALEVDYKNHTLWLQYAEVEMKNKFINHARNVWDRAVTLLPRIDQLWYKYIHMEEMLGNVAGARQVFERWMKWMPDQQGWLSYIKFELRYNEVERARGIFERFVQCHPRVGAWIRYAKFEMKNGEVVRARNVYEKALEKLADDEEAELLFVAFAEFEERCKETERARAIYKFALDHIPKGRAEDLYRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVGKSPTNYDSWFDYIRLEESVGNKERVREVYERAIANVPPAQEKRLWQRYIYLWINYALYEELDAGDVGRTRDVYRECLNLIPHQKFSFAKIWLLAAQFEIRQLNLKAARQILGNAIGQAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELERSLAETDRARAIFEVAIAQPALDMPELLWKAYIDFETGEGEFDNARALYQRLLDRTKHLKVWMSYAEFEATAIKDDLDETEEALEQKKQCIQRARSMLNWNNFLILFMFWFVPASGVFEEALNYFRSSASDLKEERAMLLEKWLNMETTAFGELGDVSLVQSKLPKKLKKRRHVTTEDGSTRIEEYIDYLFPDETQTTNLKILEAAYKWKKQKLSSGDD 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1551 718 Gene3D Tetratricopeptide repeat domain 483 688 IPR011990 GO:0005515
Lal23g1551 718 Gene3D Tetratricopeptide repeat domain 332 482 IPR011990 GO:0005515
Lal23g1551 718 Coils Coil 573 596 - -
Lal23g1551 718 SMART hat_new_1 436 467 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 206 237 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 276 310 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 239 274 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 469 501 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 139 171 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 354 388 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 105 137 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 173 204 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 539 570 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 503 537 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 398 434 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 71 103 IPR003107 GO:0006396
Lal23g1551 718 SMART hat_new_1 320 352 IPR003107 GO:0006396
Lal23g1551 718 Coils Coil 241 261 - -
Lal23g1551 718 Pfam HAT (Half-A-TPR) repeat 207 235 IPR003107 GO:0006396
Lal23g1551 718 SUPERFAMILY TPR-like 526 588 IPR011990 GO:0005515
Lal23g1551 718 SUPERFAMILY TPR-like 267 523 IPR011990 GO:0005515
Lal23g1551 718 PANTHER - 613 716 - -
Lal23g1551 718 PANTHER - 22 597 - -
Lal23g1551 718 Gene3D Tetratricopeptide repeat domain 124 331 IPR011990 GO:0005515
Lal23g1551 718 PANTHER PRE-MRNA SPLICING FACTOR 22 597 IPR045075 GO:0000398
Lal23g1551 718 PANTHER PRE-MRNA SPLICING FACTOR 613 716 IPR045075 GO:0000398
Lal23g1551 718 SUPERFAMILY TPR-like 81 205 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1551 K12869 - gmx:100811745 1262.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1551 23 15600420 15605212 Lal23g1551 23 15600420 15605212 ECH