Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1548 ATGCGTAGCCGGGGATCGCAGAACCGGCTATCTGGTTACTCTTCATTCGGATCTCCACTTTATGCTCTTTTGCTCGCCCTCGTTGCCGCCATTGCTACTCTCTACGTTGCCGAAAGGTTATGGCAGGATGCAGAAAGTAGGGTATATTTACTTGAAGAGCTACAAAGAAGGACTGGTCAGGGCCAATCTGCCGTATCTGTTGATGATACACTGAAAATTATAGACTGCAGGGAACAGCAGAAGAAGTTGTCTGCCCTTGAGACAGAACTAGCCGCAGCTAGACAGGAAGGTTTTGTTCCAAAGCATTTGTCGGGGAATGATGGGAAGCATCCTACAAAGAAGGTACTTTTAGTTATAGGAATAATGACAACCTTTGGCCGAAAAAAGAACCGAGATGCGATCCGTAAAGCATGGATGCCAACAGGTGCAGATATGAAAAAACTGGCTGATAAAAAAGGCATCATTGCCCGGTTTGTAATAGGAACAAGTGCAAATCGTGGAGACAATTTGGACAAAGAAATTGAAACAGAAAACACTCAGAGCCATGATTTCATTATTCTTGATGGTCAAGTGGAGGCACCTGAAGAGAAATCCAAAAAGATAAAATCATTCTTCATTTATGCTGCAGACAAGTGGGATGCTGCATTTTATGTTAAGGTCAATGACGATGTCTTTGTTAATCTTGATGCCCTTGGAGAAGTGCTAACTTCTCATTTGGATGAGCCTCGTCTTTATATTGGATGTATGAAATCAGGCGAAGTTTTCTCCGAGTCGACACATAGATGGCATGAACCAGACTGGTGGAAATTTGGCGACGGAAAATCGTACTTTCAACATGCTTCGGGCCAGGTCTATGTTATTTCAAAAGCATTGGCTCAGTTTATTTCAATAAACAGAGCTTTTCTTCGTACGTATGCACATGATGATGTAAGCACTGGATCATGGTTTATTGGGCTCGATGTGATACACCTTGATGAAAGGAAGTTTTGCTGCTCCTCTTGGTCCCCAGCTAAACGTTGA 1020 0.4304 MRSRGSQNRLSGYSSFGSPLYALLLALVAAIATLYVAERLWQDAESRVYLLEELQRRTGQGQSAVSVDDTLKIIDCREQQKKLSALETELAAARQEGFVPKHLSGNDGKHPTKKVLLVIGIMTTFGRKKNRDAIRKAWMPTGADMKKLADKKGIIARFVIGTSANRGDNLDKEIETENTQSHDFIILDGQVEAPEEKSKKIKSFFIYAADKWDAAFYVKVNDDVFVNLDALGEVLTSHLDEPRLYIGCMKSGEVFSESTHRWHEPDWWKFGDGKSYFQHASGQVYVISKALAQFISINRAFLRTYAHDDVSTGSWFIGLDVIHLDERKFCCSSWSPAKR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1548 339 Coils Coil 76 96 - -
Lal23g1548 339 Pfam Domain of unknown function (DUF4094) 22 95 IPR025298 -
Lal23g1548 339 PANTHER HEXOSYLTRANSFERASE 1 337 - -
Lal23g1548 339 Pfam Galactosyltransferase 130 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lal23g1548 339 Gene3D - 105 332 - -
Lal23g1548 339 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 337 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1548 Lal-Chr23 15575260 15580239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1548 23 337 Glycosyltransferase AT5G53340 65.714 1.41e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1548 K20854 - gmx:100802753 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1548 23 15575260 15580239 Lal23g1548 23 15575260 15580239 ECH