Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1547 ATGCAGTCACAGTCACACAGCTTTCTATGTCCACATTCACTCACATTCTTTCCTAAACCATTCTCTAATTTCATTCTCCCACTCTCTAAAACTCATCATCACACCTCAACTTTCTCAATTCAAACTAATTTGTCAATGTTCCTTTCTTTTCATGAAATTGCAAGGCCCTCTGCCTTTAAGGACTTTCCTTCCTTCAATCTACCATCGCTTTTCCAATTCCAAAAGCTTCCGGCTACAAGGGCATCCACTCGTGCTTACAAGAATTGTGTAGCAGTGGAATCTTGCAATGACTTGTGTGAATTGGTTTCTGACAATCACAATTGGGAATGTGACATAGCTCCACATATTGTTTCTTCTGATATTGACAATTCAACCAGTGGGCTTCTCAAATTTATGCTGTTCTTTGGACTGATCACACTTCAACACTCTTATCCAGCTGCTGCTGCTGCTTCAGATTTTGCCACTGGGTTCAGTACACTTCCTAATTTTGGAGATATCGGTGACTTAAGCACAGGTTTTGCTTCAGCGTTTCTGCTAATATTTTTCTCTGAATTGGGAGATAAGACCTTTTTCATTGCAGCACTGTTAGCAGCTAGGAATTCAGCTGGTGTTGTTTTCACTGGGACATTTGGCGCACTTGGGGCAATGACTCTCATATCTGTTGCTCTTGGACGAACTTTTCATTATGTTGATGAAATCTTGCCTTTCAGGTTAGGAGAGACTGATTTACCTGTTGATGACATAGCTGCAGTTTGTCTGTTGGTCTACTTTGGGATCTCTACACTCCTGGATGCCTCATCAAGTCATGGCCAAAAATCAGATGATGAACAAAAGGAGGCAGAACTAGCAGTTTCAGAATTTTCTGGAAATGGTTCGGGGATACTAGCTGCTGCTAGCACGGCTGCCAGCACTTTCCTCTTAGTTTTTGTTGCTGAATGGGGTGACAAATCTTTTTTCTCCACGATTGCCCTTGCAGCAGCTTCTTCACCTCTTGGAGTCATAGGGGGAGCACTAGCTGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGGGGCTCTTTACTGGGGACATTTTTGTCAGAGAAGGTTATTGCCTACATCGGTGGTGTTCTATTTCTTGTCTTCGCCGCGGTAACTGTATTTGAAATTGTGCAGTAG 1158 0.4283 MQSQSHSFLCPHSLTFFPKPFSNFILPLSKTHHHTSTFSIQTNLSMFLSFHEIARPSAFKDFPSFNLPSLFQFQKLPATRASTRAYKNCVAVESCNDLCELVSDNHNWECDIAPHIVSSDIDNSTSGLLKFMLFFGLITLQHSYPAAAAASDFATGFSTLPNFGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFTGTFGALGAMTLISVALGRTFHYVDEILPFRLGETDLPVDDIAAVCLLVYFGISTLLDASSSHGQKSDDEQKEAELAVSEFSGNGSGILAAASTAASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1547 385 PANTHER PROTEIN PAM71, CHLOROPLASTIC 115 385 - -
Lal23g1547 385 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 115 385 IPR001727 -
Lal23g1547 385 Pfam Uncharacterized protein family UPF0016 175 258 IPR001727 -
Lal23g1547 385 Pfam Uncharacterized protein family UPF0016 303 376 IPR001727 -
Lal23g1547 385 ProSitePatterns Uncharacterized protein family UPF0016 signature. 184 193 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1547 Lal-Chr23 15569176 15573792 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1547 - - lang:109331470 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1547 23 15569176 15573792 Lal23g1547 23 15569176 15573792 ECH