Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1528 ATGGTGAATCGACGGTTTACTCAAGTAGCCACCAGCGATGATGAAGATGAATCGCCACTTCAATCTCCTCCACAATCCAAGCAACAACCTAAGAGGAAAAGAATGACGCTTCTTTATGAAGACGATGATGATGAAGAAGATAACAATGAGAAATCCAATGAAAACAATAATAATGAGAAAGAATTACATGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAGGAGGAAGCGTTAGCTGAAGCTAAACCTGTTGGAGATCCGGTTAGGGTTTCAGGAAAGGGGAAAAACAGAAGGAAACATTTTCACACCCTCGAATATGATACTAATCATTACACACTCGAGGATCCTGTTCTTCTCATTCCCGAGGATTCAGAACAAAAGCCATATGTCGCCATTATTAAGTTGAAGAAACTAAAAACGTTCAACATTTTAGCTGCTGCAGTTGCAGACATTACACAGCGCCAAGATGGTAGCATGATGATGACAGGGCAATGGTTTTATCGTCCTGAAGAAGCACCCAAAAAAGGCGGTGGATCCTGGAAGCCAATTGATACAAGGGAGCTGTTTTATAGTTTCCACCAAGATGAGGTTCCTGCCGAGTCTATTATGCATAAGTGTATCACACACTTCATTCCTCCTCACAAACAGCTTCCAAAGCGGAAGCAATATCCCGGGTTTATTATACAAAAGGTGTATGATGTTGAAGAAAGAAAACTCTTTAGGTTAACTGATAAGGACTTTCACAACGGAAAACAAAAAGAAATTAATGTGCTCATTGAGAAAACTCTGAGACATATAGGTAATGATCTACTTGACATTGAGACTGGACAAGCCCCTGCAGATCAGGATCACGAGGTGAAAAATAAACGAAAATTTATGAGAAAGAACATTTCACCTCTTGATGTTTCAAGGGAGGAGGAAGAAAATCCTACTAGTGACAAACATTTGAAGCCTGAAACACCAGGGAGCTGTCTAAATAATGCTTCAGAGCATTATCGCATACTGATGAATTTCAATGCACTAACTGGAGATGCCCATCGTGACAAATGGTTGGAGAGGATGCTTCAGCACATTCAGTACATATGTAATTCTGATGATATCACAGAAAGGGATGACAAGGGATTGCGAAATGCCAATTTTGCTGAAATAAAAATTACAAGCAATAATACAAGTTTAGAATCTCGAAATGATTGCCAAATCAAGGTTTCCAAGTGTTTTATCTGGCCAGATGCTGCAGTTCCTGCAATAGTTGCTCTTGAAAAAGCTTCACATGAAGCTCTTTCATCAGATTTTCAGAAGTATAACCAAAAGCTGAGGTCCCTAGATTTTAATCTCAAGAGCAATGCATTTCTTGCACGTCGTCTATTAAACGGAGAGTTGGAACCTTCAAAAATAGTAAATATGACACCCACTGAATTGAAGGAGGGTTTGACTGATGAGGAAATAGCCAAGAAAGAGCCTGATGAGTTACAAAACATGCAGATGACAGATGTCCGGTGCTCAAGATGCAACAAATCTAAGGTGGGCGTGAGGGATATTATCCGTGCTGGAGGTAGTGACCGATATCAGCTGGAATGTATTGGCTGTGGTAATTCCTGGTATGGCTCCCGGGATGAGGTGTCTACTCTTACCATAGATGGACCAACTTCAAAGAGAAGCAATGGAACAGAGGCATTGCGAACTGCAAACTTAGTAGATGGTGAGAAGAAGGTGGCGAGTCATCGTGAATCTGATAAGTCAGCAAAGGACGAGGAAGGAGAGAAGTGA 1773 0.4078 MVNRRFTQVATSDDEDESPLQSPPQSKQQPKRKRMTLLYEDDDDEEDNNEKSNENNNNEKELHDEEEEEEEEEEEKEEALAEAKPVGDPVRVSGKGKNRRKHFHTLEYDTNHYTLEDPVLLIPEDSEQKPYVAIIKLKKLKTFNILAAAVADITQRQDGSMMMTGQWFYRPEEAPKKGGGSWKPIDTRELFYSFHQDEVPAESIMHKCITHFIPPHKQLPKRKQYPGFIIQKVYDVEERKLFRLTDKDFHNGKQKEINVLIEKTLRHIGNDLLDIETGQAPADQDHEVKNKRKFMRKNISPLDVSREEEENPTSDKHLKPETPGSCLNNASEHYRILMNFNALTGDAHRDKWLERMLQHIQYICNSDDITERDDKGLRNANFAEIKITSNNTSLESRNDCQIKVSKCFIWPDAAVPAIVALEKASHEALSSDFQKYNQKLRSLDFNLKSNAFLARRLLNGELEPSKIVNMTPTELKEGLTDEEIAKKEPDELQNMQMTDVRCSRCNKSKVGVRDIIRAGGSDRYQLECIGCGNSWYGSRDEVSTLTIDGPTSKRSNGTEALRTANLVDGEKKVASHRESDKSAKDEEGEK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1528 590 Gene3D - 337 477 IPR036575 GO:0006351
Lal23g1528 590 SUPERFAMILY Elongation factor TFIIS domain 2 345 476 IPR036575 GO:0006351
Lal23g1528 590 SMART mid_6 394 485 IPR003618 GO:0006351
Lal23g1528 590 Gene3D - 24 227 IPR043151 -
Lal23g1528 590 ProSiteProfiles BAH domain profile. 111 245 IPR001025 GO:0003682
Lal23g1528 590 MobiDBLite consensus disorder prediction 61 78 - -
Lal23g1528 590 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 586 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 547 562 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 282 317 - -
Lal23g1528 590 SMART BAH_4 111 245 IPR001025 GO:0003682
Lal23g1528 590 Pfam Transcription factor S-II (TFIIS), central domain 344 495 IPR003618 GO:0006351
Lal23g1528 590 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 586 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 1 32 - -
Lal23g1528 590 ProSiteProfiles TFIIS central domain profile. 396 503 IPR003618 GO:0006351
Lal23g1528 590 Coils Coil 48 84 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 547 590 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 282 324 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 565 590 - -
Lal23g1528 590 MobiDBLite consensus disorder prediction 1 98 - -
Lal23g1528 590 Pfam BAH domain 112 242 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1528 Lal-Chr23 15431332 15435201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1528 - - cam:101495294 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1528 23 15431332 15435201 Lal23g1528 23 15431332 15435201 ECH