Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1512 ATGTGCAAGTTATCATCATCATCATCTGGCTCTAATACATGTACAATGAAAACAACAAAGAACCCTTCTTCCGACATGTTGAGTCCTTTGATACCAAAATCCCCAACATCAGAACAAGGCACAAAACCCCACCACAAGAATCATTTTATTGTGGCCCTCCAAGAAGCAAAATGCATAGCAAATATCTCATTACCTATGATCTTAACTGGCCTATTACTCTACTCTCGTTCCATAATCTCAATGTTTTTCCTTGGTCACCTTGGTCAACTTTCTCTAGCTGGTGGTGCTTTAGCCATTGGTTTTGCCAACATCACTGGTTATTCACTTCTCTCTGGCCTTGCCATGGGAATGGAACCAATTTGTGCTCAAGCCTTTGGAGCCAAAAGGTTTAAACTTTTAGGCCTTGCTATGCAAAGAACAACACTCCTTCTTCTTCTTATTTCAATCTTCATATCGTTTCTATGGCTCAATATGAAGAAAATTTTGTTACTTTGTGGTCAACAAGAGGATATAGCAACTGTAGCACAATCTTACATACTTTATTCTCTTCCTGATCTCATTGCTCAATCATTCTTACACCCTTTGAGGATTTATCTTCGAAGCCAATCTATAACAATTCCTCTCACATATAGTGCTGCTCTGTCTATTCTTTTTCATGTCCCTATCAATTATTTGCTTGTATCAGTGCTTCAGCTTGGGATCAAAGGCATCGCCTTAGGTGCGGTTTGGACTAATTTCAACCTCGTCGCTTCGTTGATCATATATATTTGGATTTCAGGTGTTTATAAGAAAACATGGAATGGAATTTCCTCAAGTTGCTTCAAAGGTTGGAAGACACTATTGAATTTGGCTATTCCAAGTTGCATTTCGGTTTGCCTTGAATGGTGGTGGTACGAAATCATGATTGTACTATGTGGATTATTGATTAATCCTCAAGCAACCGTTGCATCAATGGGTCTATTGATTCAAGCCACCGCTTTCATATACATTTTCCCATCTTCTTTAAGCTTTGGTGTGTCTACAAGAGTTGGAAATGAACTTGGTGCTGAGAATCCTCAAAGAGCAAAACTTGCAGCATTTGTGGGACTATGTATCAGTTTCATGTTGGGTTTCTGTGCATTGGTGTTTGCTATTTCAGTGAGGAATATGTGGGCTGCAATGTTCACACACGATGCAGAGATTATTGCTTTAACATCAATGGTGTTACCTATTGTTGGATTATGTGAACTTGGAAATTGTCCACAAACAACTGTTTGTGGAGTTTTGAGAGGAACAGCTAGGCCAAAATTAGGTGCAAATATTAACTTGGGTTGTTTCTATCTTGTTGGAATGCCAATTGCAATTTGGCTGAGTTTCTTTGCAGGTTTTGACTTCAAAGGTTTATGGCTTGGTCTTTTGGCTGCTCAAGGTTCTTGTATGATTACCATGTTGTTTGTTTTAGCTCGAACTAATTGGGAAGGTGAAGCACTAAGGGCCAAGGAACTTACTTCATCTGAAGAGGATAATGTGCTGGTTGTGGAGGAAGAGGAACAAGATCAAAAATGTTCTTTGAAACAATGCTCTGATTCATTAGTTTGA 1578 0.3897 MCKLSSSSSGSNTCTMKTTKNPSSDMLSPLIPKSPTSEQGTKPHHKNHFIVALQEAKCIANISLPMILTGLLLYSRSIISMFFLGHLGQLSLAGGALAIGFANITGYSLLSGLAMGMEPICAQAFGAKRFKLLGLAMQRTTLLLLLISIFISFLWLNMKKILLLCGQQEDIATVAQSYILYSLPDLIAQSFLHPLRIYLRSQSITIPLTYSAALSILFHVPINYLLVSVLQLGIKGIALGAVWTNFNLVASLIIYIWISGVYKKTWNGISSSCFKGWKTLLNLAIPSCISVCLEWWWYEIMIVLCGLLINPQATVASMGLLIQATAFIYIFPSSLSFGVSTRVGNELGAENPQRAKLAAFVGLCISFMLGFCALVFAISVRNMWAAMFTHDAEIIALTSMVLPIVGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPIAIWLSFFAGFDFKGLWLGLLAAQGSCMITMLFVLARTNWEGEALRAKELTSSEEDNVLVVEEEEQDQKCSLKQCSDSLV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1512 525 Pfam MatE 286 448 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g1512 525 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g1512 525 MobiDBLite consensus disorder prediction 1 43 - -
Lal23g1512 525 MobiDBLite consensus disorder prediction 1 38 - -
Lal23g1512 525 PANTHER PROTEIN DETOXIFICATION 41 505 - -
Lal23g1512 525 TIGRFAM matE: MATE efflux family protein 65 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal23g1512 525 CDD MATE_eukaryotic 55 489 IPR045069 GO:0042910|GO:1990961
Lal23g1512 525 PANTHER MULTIDRUG RESISTANCE PROTEIN 41 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1512 Lal-Chr23 15314234 15315811 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1512 K03327 - gmx:100811560 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1512 23 15314234 15315811 Lal23g1512 23 15314234 15315811 ECH