Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1502 ATGGCGACACGAAGAACCACATCACTCCTCAAACGCCTCTTCGCCTCGCATTCCCGCCTCAACCAAACCCGATCCGTCACCTACATGCACCGTCCCGGTGACGGCACCCCGCGCGCCGTCACTCTCATCCCCGGCGACGGGGTCGGACCTCTAGTCACCGGATCTGTCGAACAGGTGATGGAAGCGATGCACGCGCCGGTGTATTTCGAGAAATTCGACGTCCACGGTGACATGAAAGCGGTGCCGGCGGAGGTGATCGAGTCGATCAAGAAGAATCAGGTGTGCCTGAAGGGTGGGCTTGCGACGCCGATGGGTGGTGGTGTTAGCTCTCTGAACGTGCAGTTGAGGAAGGATCTTGACCTATACGCTTCACTCGTTAACTGCTTCAACCTCCCCGGGTTGCCCACGCGCCATGATAGCGTTGATATTGTGGTGATTAGGGAGAACACTGAGGGAGAGTATTCTGGCCTTGAACACGAGGTCGTTCCCGGCGTCGTCGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCGGAGCGCATTGCTAAATATGCTTTCGAGTATGCTTACCTAAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAATATTATGAAGCTTGCAGATGGTTTATTCTTGGAATCATGTCGGGAGGTCGCTGCAAATTATCCTGGAATCAAGTATAATGAAATTATTGTCGATAACTGCTGCATGCAGCTTGTTTCCAAGCCTGAGCAGTTTGATGTCATGGTGACCCCCAATCTTTATGGAAATCTTGTGGCAAATACTGCAGCAGGTATTGCTGGAGGCACTGGAGTCATGCCCGGAGGTAATGTTGGGGCTGAGAATGCTGTGTTTGAGCAAGGCGCTTCTGCAGGAAATGTTGGTGATAATAAAGTAGTGGAACAAAAGATAGCCAACCCAGTGGCACTGCTTCTTTCATCGGCCATGATGCTTAGACATCTCCAGTTTCCTGCATTTGCTGACCGATTGGAAACTGCTGTGAAACGAGTCATTCTAGAGGGTCAACACCGGACAAAGGACCTTGGAGGGACAAGCACCACCCAAGAGGTTACTGATGCAGTGATAGCTGCTTTAGAATGA 1104 0.5091 MATRRTTSLLKRLFASHSRLNQTRSVTYMHRPGDGTPRAVTLIPGDGVGPLVTGSVEQVMEAMHAPVYFEKFDVHGDMKAVPAEVIESIKKNQVCLKGGLATPMGGGVSSLNVQLRKDLDLYASLVNCFNLPGLPTRHDSVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAANYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAENAVFEQGASAGNVGDNKVVEQKIANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGQHRTKDLGGTSTTQEVTDAVIAALE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1502 367 Gene3D Isopropylmalate Dehydrogenase 22 366 - -
Lal23g1502 367 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 17 365 - -
Lal23g1502 367 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 38 366 - -
Lal23g1502 367 Pfam Isocitrate/isopropylmalate dehydrogenase 40 362 IPR024084 -
Lal23g1502 367 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 17 365 - -
Lal23g1502 367 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 36 365 IPR004434 GO:0006099
Lal23g1502 367 SMART Iso_dh_2 39 362 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1502 Lal-Chr23 15255223 15259076 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1502 K00030 - gmx:100778831 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1502 23 15255223 15259076 Lal23g1502 23 15255223 15259076 ECH