Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1500 ATGAATTTTAAAACCATTGAAGACGTTGAGATAAGAGAAGACCAATTTGAGTGTTCAGCAAACTATGTACCTTTGTCACCCATCACTTTCCTAGAACGAGCAGCCACTGTCTATGGTGATGATAAAATCTCCATCATCTATGGTGATCATGTCAGGTTTTCATGGCGACAAACTCATCAAAGATGTCTCAAACTCGCTTCTTCTTTGGTCAACTTTGGGATTTCTCATGGTGATATTGTTACAGCTTTGGCACCAAACATTCCGGCACTGTATGAGCTTCACTTTGGTGCTCCTATGGCAGGTGCTATTCTTTCTGCACTCAACACCAATTTGGATGTTACAACTTTGGCACTCTTATTGGAACAACTACAGTCCTGCAAAATCATATTTGTTTACTATCAGTTTATTGATTCTGCTCTCAGAGCATTTGAAATAATGTCTCAAAGAAAATGTAAACCACCCCTCATTGTCCTAATCACAGATTATTATGACCAAAAACAATCTTTCTTAGCAAAGGACAAGCCACCAAAAAATACTTTAAACTACAATGATTTTCTTGCAATGGGAGAACCAGATTTTGAGACTTTAAGACCAAGCAATGATTTTGATCCAATATCAGTGAATTTTACATCAGGCTCAACAGGGACTCCTAAAGGGGTTGTTTATAGTCATAGAGGTGCATATCTTAATTCACTTGCAGTAATTGCTCGTTTTGACATGAAACCAATGTCAGTGTTTCTATGGACAGTTGACATGTTTCGTTGCAACGGTTGGTGCTTCACTTGGGCAATGGCTGCTCTTGGTGGCACCAACGTTTGTATCAGAAATGTTTCAGCAACAGATATATTTGATGCAATACACCTTCATAAGGTAACACATTTGTGTGGTGCACCTACCCTTTTGGCTATGAATGCAGCAGATGCATCATCCTATGATCAGAGGCCTCTGCCTCATAGGGTGAAAGTCACTGTTGCTGGTGTACTACCACCATTTCAAATTATCAACAAGGTAGCAATAGAACTTGGATTTGATGTGTGCATTGGATATGGTATGACAGAGACAATGGGACCTGCAATTCTAAGACCATGGAAACCAGATTCAGATGATGAACACACAAAGTTTAATTATTATTATGATGAAAAGGGTCTTCCAGATTTTATGATGCAACAAGAGGTTGATGTGAAAGATCCAAAGACTATGAAGAGTTCACCTCATGATGGTAAAACCATTGGTGAAATCATGTTCAAAGGTAATACTGTAATGCTGGGTTACCACAAGAATTCACAAGCAACTGAAGAAGCATTTAGGGGTGGATGGTATAGGACTGGTGACCTTGGAGTTTGTGAACATAATGGTTCTATAACATTGAAAGATAGAGCCAAAGATATGATATATTCAAAGGGAGAGGGTATAAGCACACTAGAGATAGAGACAGTGCTGTTGAGTCATCCAATGATATTGAATGTAGCTGTTGTGGGAAGATATGATGATAGGTTGTTGAAGTCATCACTATATGCAGTTGTGAGATTGAAGGATGGATATAGTGCAAGTGTTGAAGATATTATCAAGTTTTGTGAACAGAATTTGGCTACTCACATGGTTCCTAAGTATGTGGTTTTTGGAGATTTGCCTGTTAATTCAACAGGGAAAGTACAGAAGTTTCTTATTAGAGAGAACATAAAAAACAGTAAAGTTGCAATCAATGAATTATGA 1713 0.3818 MNFKTIEDVEIREDQFECSANYVPLSPITFLERAATVYGDDKISIIYGDHVRFSWRQTHQRCLKLASSLVNFGISHGDIVTALAPNIPALYELHFGAPMAGAILSALNTNLDVTTLALLLEQLQSCKIIFVYYQFIDSALRAFEIMSQRKCKPPLIVLITDYYDQKQSFLAKDKPPKNTLNYNDFLAMGEPDFETLRPSNDFDPISVNFTSGSTGTPKGVVYSHRGAYLNSLAVIARFDMKPMSVFLWTVDMFRCNGWCFTWAMAALGGTNVCIRNVSATDIFDAIHLHKVTHLCGAPTLLAMNAADASSYDQRPLPHRVKVTVAGVLPPFQIINKVAIELGFDVCIGYGMTETMGPAILRPWKPDSDDEHTKFNYYYDEKGLPDFMMQQEVDVKDPKTMKSSPHDGKTIGEIMFKGNTVMLGYHKNSQATEEAFRGGWYRTGDLGVCEHNGSITLKDRAKDMIYSKGEGISTLEIETVLLSHPMILNVAVVGRYDDRLLKSSLYAVVRLKDGYSASVEDIIKFCEQNLATHMVPKYVVFGDLPVNSTGKVQKFLIRENIKNSKVAINEL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1500 570 CDD ttLC_FACS_AEE21_like 22 558 - -
Lal23g1500 570 Gene3D - 461 566 IPR045851 -
Lal23g1500 570 PANTHER ACYL-ACTIVATING ENZYME 34 562 - -
Lal23g1500 570 SUPERFAMILY Acetyl-CoA synthetase-like 16 562 - -
Lal23g1500 570 Gene3D - 11 460 IPR042099 -
Lal23g1500 570 Pfam AMP-binding enzyme C-terminal domain 475 550 IPR025110 -
Lal23g1500 570 Pfam AMP-binding enzyme 32 465 IPR000873 -
Lal23g1500 570 ProSitePatterns Putative AMP-binding domain signature. 207 218 IPR020845 -
Lal23g1500 570 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 34 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1500 Lal-Chr23 15247612 15253489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1500 90 561 Miscellaneous Gene Families AT1G20560 47.034 3.25e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1500 - - lang:109330780 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1500 23 15247612 15253489 Lal23g1500 23 15247612 15253489 ECH