Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1469 ATGGCACCTATCAAAACCCTCACTTCTCTAGTTGATGAAAAAACCCTTGAGTCTAGTTTCGTTCGTGATGAAGATGAACGTCCAAAAGTTGCATACAACAAATTCAGCAATGACATTCCAGTGATTTCACTAACTGGGATTGATGAGGTGAATGGGAGGAGAGAAGATATTTGCAAGAAGATTGTGGAGGCGTGTGAGGAATGGGGTATCTTTCAAATTGTTGATCATGGTGTGGACATGAAACTCATTTCAGAGATGACACGTTTTGCCAAAGAGTTCTTTGATTTGCCATCAGAAGAGAAGCTTCGGTTTGACATGTCCGGTGGCAAGAAGGGTGGTTTCATAGTCTCCAGCCACCTCCAAGGAGAACAAGTGAGAGATTGGAGAGAGATTGTGACATACTTTTCATACCCAATTGGAAAAAGAGATTATTCAAGGTGGCCAGACAAGCCAGAAGGGTGGAAAAATGTGACAAAGGAGTACAGTGAAAAGCTTATGAATTTAGCATGTAAGCTATTAGAGGTGTTATCAGAAGCAATGGGTTTAGAGAAAGAAGCATTGACAAAAGCATGTGTTGATATGGACCAAAAGGTTGTAGTTAATTATTACCCTAAGTGTCCACAACCTGACCTTACATTAGGACTGAAGCGCCACACAGATCCAGGTACCATTACCCTTCTGCTTCAGGACCAGGTTGGAGGCCTTCAAGCTACTAGGGATGATGGCAACACTTGGATTACTGTTCAGCCTATTCAGGGAGCTTTCATTGTCAACCTTGGTGATCATGGCCACTATCTGAGCAATGGAAGGTTCAAGAATGCTGATCACCAAGCAGTAGTGAACTCTGAATGTAGCCGTCTATCCATAGCCACATTCCAAAACCCAGCACCTGAAGCAAAAGTGTATCCACTCATGATCAGAGAAGGAGATAAGCCTATACTTAAGGAACCAATGTCATTTTCAGAAATGTATATTAAGAAGATGAAGAATGACATTGAGATTAGTAGGCTAAAGAAGTTGGCCAAGGAGGAGAAGCAATTGCAAAACTTCGACATGGCCAAACTAGAGCCAAAACCTATCGAGGAAATTCTTGCATAA 1098 0.4199 MAPIKTLTSLVDEKTLESSFVRDEDERPKVAYNKFSNDIPVISLTGIDEVNGRREDICKKIVEACEEWGIFQIVDHGVDMKLISEMTRFAKEFFDLPSEEKLRFDMSGGKKGGFIVSSHLQGEQVRDWREIVTYFSYPIGKRDYSRWPDKPEGWKNVTKEYSEKLMNLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPIQGAFIVNLGDHGHYLSNGRFKNADHQAVVNSECSRLSIATFQNPAPEAKVYPLMIREGDKPILKEPMSFSEMYIKKMKNDIEISRLKKLAKEEKQLQNFDMAKLEPKPIEEILA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1469 365 SUPERFAMILY Clavaminate synthase-like 12 330 - -
Lal23g1469 365 Pfam 2OG-Fe(II) oxygenase superfamily 196 294 IPR044861 -
Lal23g1469 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 295 IPR005123 -
Lal23g1469 365 PANTHER NARINGENIN,2-OXOGLUTARATE 3-DIOXYGENASE 4 355 - -
Lal23g1469 365 Gene3D - 2 334 IPR027443 -
Lal23g1469 365 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 355 - -
Lal23g1469 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 39 149 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1469 Lal-Chr23 15043640 15046668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1469 38 327 Glycosyltransferase AT5G59530 31.457 8.96e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1469 K00475 - tcc:18610772 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1469 23 15043640 15046668 Lal23g1469 23 15043640 15046668 ECH