Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1441 ATGGCAGGTTCATCTGAAGAGGGACAAGTCATAGGGTGCCACACTGTTGAGGCATGGAACCAACAGCTCCAAAGGGGCAATGAATCCAAGAAAATCATGGTTGTGGATTTCACTGCTTCTTGGTGTGGACCATGCCGTTTCATTGCACCATTCCTGGCAGAGCTGGCTAAGAAGTTTACGGATTTCATATTTCTAAAGGTGGATGTGGATGAATTGAAGTCTGTTGCTCAAGATTGGGCTGTGGAGGCTATGCCCACTTTTGTGTTTATCAAAGAGGGAACTATTCTGGGCAAAGTGGTGGGAGCAAAGAAAGATGAGCTACAGCAGACACTAGAAAAACATGTAGCTGCAGCTAGTGCTTAA 363 0.4573 MAGSSEEGQVIGCHTVEAWNQQLQRGNESKKIMVVDFTASWCGPCRFIAPFLAELAKKFTDFIFLKVDVDELKSVAQDWAVEAMPTFVFIKEGTILGKVVGAKKDELQQTLEKHVAAASA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1441 120 ProSitePatterns Thioredoxin family active site. 34 52 IPR017937 -
Lal23g1441 120 Gene3D Glutaredoxin 2 119 - -
Lal23g1441 120 PANTHER THIOREDOXIN 5 119 - -
Lal23g1441 120 SUPERFAMILY Thioredoxin-like 8 116 IPR036249 -
Lal23g1441 120 Pfam Thioredoxin 13 112 IPR013766 -
Lal23g1441 120 ProSiteProfiles Thioredoxin domain profile. 1 116 IPR013766 -
Lal23g1441 120 PRINTS Thioredoxin family signature 33 41 - -
Lal23g1441 120 PRINTS Thioredoxin family signature 41 50 - -
Lal23g1441 120 PRINTS Thioredoxin family signature 80 91 - -
Lal23g1441 120 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 5 119 - -
Lal23g1441 120 CDD TRX_family 21 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1441 Lal-Chr23 14816786 14819481 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1441 K03671 - gmx:100499701 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1441 23 14816786 14819481 Lal23g1441 23 14816786 14819481 ECH