Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1432 ATGTTTACCCTAAAGGAAATGCCGACAGCAACATCCACATTGTTCTCTTCCTATGCTTCTTTTGCCGCTACAACCATGTTGATCCGTTCTATTGCCAATGAACTCATTCCTCATCCTCTTCGTCTTTATCTCAACTCTTTATTTCACTTCTTATTCACTCCTCTTTCTTCTAATCTTACTCTCATTATTGATGATTACTCCTCCAATGGCATGACTCGAAACCAAGTCTACGATGCAGCCGAGATCTACCTTAGCACTAAGATTCATACCTCTACCAAGGGCCGCTTACGTGTCAGCAAAACACATCGACAAAAGAGCTTAATGGTCACCATCGAAAAGGATGAAGAAATTAATGATAGGTTTGACAACATTCGACTTAAGTGGAGATTCGTCTGCATTGAGAGACAAGACCAAAACGAGAAGCGTTGTTTTGAACTCACTTTTCACAAGAAGTTCAAAGACAAGGTGTTGGATTCTTATCTGCCTCATGTTCTTGATAGAGCTAGTGAGATTAGGAACAATGAGAGGGTGTTGAAGCTCTATAATAGACATTGCCCCTATGATAATGATAGCACAGGAGGAGGAAGAGGAGGAGGTGGAGGGGGTTGGGGTTCCATTAATCTAGAACATCCTGCAACGTTTGAGACCTTAGCCATGGATCCTTCGATGAAGAAGGCTATTATTGCGGATTTAGATAGGTTTGTGAGGAGGAAGGAGTTTTACAAGAAAGTTGGGAAAGCATGGAAAAGAGGGTACTTGTTATATGGTCCACCTGGTACTGGCAAATCAAGTTTGATTGCCGCAATGGCCAATTACCTCAAGTTTGATATCTATGATCTCGAACTTACCACTATCTTTTCTAATGCTGAACTAAGAAGGGTATTGCTCTCCACCACTAACAGATCCATTTTGGTTATTGAGGATATAGATTGTAGTATGGAGATGAAGGATCGCCACACTTTTGATCATTATGAGCAATTTGACCAACCTTCTAACTCAAAGTTGACTTTATCGGGTTTACTGAACTTAATTGATGGATTATGGTCATGCTGTGGGGACGAGAGAATCATAGTGTTCACTACAAACCATAAAGACAAACTTGATGATGCATTACTTCGTCCTGGCAGAATGGATGTGCACATAAACATGTCCTACTGTTCTGGTCACGGCTTCAAGTTGTTGGCCTCTAACTACCTCGGACTTCAAGAGAGTTGTCAAAATCCCCTTTACCACGAGGTTCATGGCCTGATAGAGACAATACATGTTACCCCTGCTGAGGTTGCAGAGATGCTAATGAAGAATGATGATGCCAATGTTGCTCTTCAAGGACTTGCTGGTTTTCTTAAACGTAAGAGAATTGAAGAAAATGAAATGAAGAATGAAGGGGTTGATGACCACAAAGTTAATGAGGCAAAGAAACTAAAATCTAATGATGATGTCAGTTCTTTCAAGCAGAAAGCAATCAATGCTTCCAACATGCTAAGGAATTCCTTCACAAGGAAGGGTAGGCATAGTAGCAAGGTTATGTCCATTGAAATTGAGGATTTCCATGATGCTGAGGAGTTACAAATTGTGGACCAGTTTCGTCAAGCTCTTATTTTGGACGAACTTCTCCCTGCAAAGCATGATGATTATCATATGATGCTCAGATTCCTAAAGGCTAGGAAATTTGACATTGATAAAACTAAGCAAATGTGGTCCGACATGCTCAAATGGAGAAAGGAATTTGGCGCTGATACTATTATGGAGGATTTTGAGTTCAAGGAACGTGAGGAAGTCCTGAAATACTATCCACAAGGACATCATGGAATAGACAAAGAAGGAAGGCCTCTGTACATAGAGAGATTAGGACAAGTTGATGCAACAAAGCTGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTAGTGGAGTTCGAGAGGACATTTGATAAGTTCGCAGCTTGTTCAATTGCTGCAAAGAAGCACATTGATCAAAGTACAACCATCTTGGATGTTTCGGGATTGGGACTAAAAAGCTTAAACAAACATGCTAGGGATCTCCTTACTCGCCTTCAAAAGGTTGATGGCGACAATTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGCTGTGGAACACCATGAAGTCTTTCCTTGATCCTAAGACGACAGCAAAAATTAATGTTCTTGGAAACAATTATCAGAGTAAATTGCTTGAAATAATTGATGCAAGTGAGTTACCTGAGTCTTTAGGAGGTACCTGTACTTGTGCTGATAAAGGAGGATGTATGCTTTCAGATAAAGGTCCATGGAATGATCCAGAAATAATGAAGATGGTTCAGAATGGTGCTCATAAATGTTCAAGAAAATCTGAGACTCCTGTAGTGGAAGAGAAAATAATCTCTGAGTTTGTGATGAGGAAGGAAGAAATGTTGAATGCTACTATTAACCGAGCCGATGCATTGGAACAAGAACTTCAAGCTACAAAGAAGGCATTGGAGGATTCAGTTACCAAACAAGAGGAACTTTCAGCATATATGGAGCAAAAGAATAAAAAGAAGAAGTGGTGCATCTGTAAGTGCAAAATGGAGGATGTTCATAGATTATCAGGGATTGACTTTTTACTCCTTTCAGGAGACTTCCCAAATGCCCTCTTAGGCTCTTATATTAATGTTCAACATACGAACTCCTAA 2703 0.4021 MFTLKEMPTATSTLFSSYASFAATTMLIRSIANELIPHPLRLYLNSLFHFLFTPLSSNLTLIIDDYSSNGMTRNQVYDAAEIYLSTKIHTSTKGRLRVSKTHRQKSLMVTIEKDEEINDRFDNIRLKWRFVCIERQDQNEKRCFELTFHKKFKDKVLDSYLPHVLDRASEIRNNERVLKLYNRHCPYDNDSTGGGRGGGGGGWGSINLEHPATFETLAMDPSMKKAIIADLDRFVRRKEFYKKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLELTTIFSNAELRRVLLSTTNRSILVIEDIDCSMEMKDRHTFDHYEQFDQPSNSKLTLSGLLNLIDGLWSCCGDERIIVFTTNHKDKLDDALLRPGRMDVHINMSYCSGHGFKLLASNYLGLQESCQNPLYHEVHGLIETIHVTPAEVAEMLMKNDDANVALQGLAGFLKRKRIEENEMKNEGVDDHKVNEAKKLKSNDDVSSFKQKAINASNMLRNSFTRKGRHSSKVMSIEIEDFHDAEELQIVDQFRQALILDELLPAKHDDYHMMLRFLKARKFDIDKTKQMWSDMLKWRKEFGADTIMEDFEFKEREEVLKYYPQGHHGIDKEGRPLYIERLGQVDATKLMQVTTMDRYIKYHVVEFERTFDKFAACSIAAKKHIDQSTTILDVSGLGLKSLNKHARDLLTRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTMKSFLDPKTTAKINVLGNNYQSKLLEIIDASELPESLGGTCTCADKGGCMLSDKGPWNDPEIMKMVQNGAHKCSRKSETPVVEEKIISEFVMRKEEMLNATINRADALEQELQATKKALEDSVTKQEELSAYMEQKNKKKKWCICKCKMEDVHRLSGIDFLLLSGDFPNALLGSYINVQHTNS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1432 900 Gene3D - 485 576 - -
Lal23g1432 900 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 473 806 - -
Lal23g1432 900 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 810 859 - -
Lal23g1432 900 Pfam Domain associated at C-terminal with AAA 36 132 IPR025753 -
Lal23g1432 900 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 589 762 IPR001251 -
Lal23g1432 900 CDD SEC14 591 757 IPR001251 -
Lal23g1432 900 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 473 806 - -
Lal23g1432 900 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 810 859 - -
Lal23g1432 900 Gene3D - 382 457 - -
Lal23g1432 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 437 IPR027417 -
Lal23g1432 900 Pfam CRAL/TRIO domain 595 756 IPR001251 -
Lal23g1432 900 Coils Coil 808 846 - -
Lal23g1432 900 SUPERFAMILY CRAL/TRIO domain 590 784 IPR036865 -
Lal23g1432 900 SUPERFAMILY CRAL/TRIO N-terminal domain 517 585 IPR036273 -
Lal23g1432 900 SMART AAA_5 248 387 IPR003593 -
Lal23g1432 900 ProSitePatterns AAA-protein family signature. 355 373 IPR003960 GO:0005524|GO:0016887
Lal23g1432 900 CDD AAA 249 385 - -
Lal23g1432 900 Pfam CRAL/TRIO, N-terminal domain 542 568 IPR011074 -
Lal23g1432 900 Pfam ATPase family associated with various cellular activities (AAA) 253 384 IPR003959 GO:0005524|GO:0016887
Lal23g1432 900 Gene3D - 577 788 IPR036865 -
Lal23g1432 900 Gene3D - 205 381 IPR027417 -
Lal23g1432 900 SMART sec14_4 589 759 IPR001251 -
Lal23g1432 900 PRINTS Cellular retinaldehyde-binding protein signature 547 569 - -
Lal23g1432 900 PRINTS Cellular retinaldehyde-binding protein signature 715 734 - -
Lal23g1432 900 PRINTS Cellular retinaldehyde-binding protein signature 748 757 - -
Lal23g1432 900 SMART CRAL_TRIO_N_2 544 569 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1432 Lal-Chr23 14772303 14778214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1432 523 751 Acyl Lipid Metabolism Gene Families AT5G47730 26.667 2.49e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1432 - - qsu:112029442 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1432 23 14772303 14778214 Lal23g1432 23 14772303 14778214 ECH