Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1430 ATGTTTTCCCTCACAAACATGCACATGCCTCCTCCTACCTCTATATTTTCTGCTTATGCCTCCATGACTGCCACTATTATGCTTCTACGTACAATGGCCAACGAGTTCATCCCTCAACCGATTCGTGGCTACATCTTTAAAGCCTTTCGCTACTTTATCAAGCCTCACTCCGCTGATCTCACCCTCATCGTTGAAGAATCCAATGGTATAGCTCGCAACCAAGTCTACGATGCTGCACAAACTTACTTGTCTACTAAAGTAAGCCCTGATAATGAGAGACTCAAGGTGAGTAAGAGTCCAAAGGAGAAAAAACTCACCATTCGTTTAGAGAAAGGTGAAAAGCTTGTTGACTCTTTTAATGGGGTTTTCTTCAAATGGAGATTTATCTGTACAGAATCAGATAAGAACAGCCACAATAACGACAGCAATAACAACAACTCCACTAGGTCAGAAAAGAAGTATTTTGAGCTGAGCTTCCACAAGAAGCACAAACAAATGGTGTTGGAATATTATCTACCTTTCATTCTTGAGAAAGCCAAGGAGATGAAAGATGAGGAAAGGGTTTTGAAGATGCACACTCTCAACACATCCTACCATCATAATGGCAAATGGGATTCCATCAATCTCGAACATCCTTCAACTTTTGACACACTGGCTATGGAGTCAGAACTGAAGAAAGAAGTCATAGAGGATTTAGATAGGTTTGTAAAGAGGAAGGAGTTTTACAAGAGAGTTGGGAGGGCATGGAAACGTGGGTACTTATTGTATGGACCTCCTGGTACAGGAAAATCAAGCTTGATTGCGGCCATGGCTAATTACTTGAAGTTTGATATCTATGATCTTCAACTTGTTAACATAGTTAGGGATTCTGACTTGAGGAACTTGCTGCTAGCTACAGCGAATAGGTCCATTTTGGTTATTGAAGATATTGATTGCACGGTGGATCTGCCCAATCGCCGCCATGGAGATGGACGTAAACAATCCGAAGTACAGGTTGGTAGTCCCAATTCTTTGACTTTGTCTGGATTATTGAATTTCATAGATGGACTATGGTCAAGTTGTGGAGATGAAAGAATAATAATTTTCACTACCAACCACAAGGAAAGGCTAGATCCTGCTCTATTAAGGCCTGGAAGAATGGATAAACATATTAACATGTCATATTGCTCCTATGAAGGCTTCAAAGTATTGGCCTCAAATTACTTGGAAATTTCCTCAGATCACCACCTCTTTGGGGAGATTAAAGGGCTAATAGAGGACACACAAATAACCCCCGCACAAGTGGCAGAAGAATTGATGAAAGATGATGACACTGAGACAACACTTAAAGGATTCATGAAGCTCCTTAAGCGAAAGAAGATGGAAGGTGATGTATGTGAAAACGATACTCAAGATAATGTTAATGCAAAAAGTAACAAATCTAAAAGGCATAAGGTTAGTAGTTGCAAGCAAAAAAGAGGTGTTGGGGTAGGAAAGAGAATTGGTGCTAGTACCCAAAGAAGGACAAGAAGCTTTGGAAGAGGATGTCTAGTCATGGATGGAATGCTCAAATAA 1554 0.4048 MFSLTNMHMPPPTSIFSAYASMTATIMLLRTMANEFIPQPIRGYIFKAFRYFIKPHSADLTLIVEESNGIARNQVYDAAQTYLSTKVSPDNERLKVSKSPKEKKLTIRLEKGEKLVDSFNGVFFKWRFICTESDKNSHNNDSNNNNSTRSEKKYFELSFHKKHKQMVLEYYLPFILEKAKEMKDEERVLKMHTLNTSYHHNGKWDSINLEHPSTFDTLAMESELKKEVIEDLDRFVKRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLVNIVRDSDLRNLLLATANRSILVIEDIDCTVDLPNRRHGDGRKQSEVQVGSPNSLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDKHINMSYCSYEGFKVLASNYLEISSDHHLFGEIKGLIEDTQITPAQVAEELMKDDDTETTLKGFMKLLKRKKMEGDVCENDTQDNVNAKSNKSKRHKVSSCKQKRGVGVGKRIGASTQRRTRSFGRGCLVMDGMLK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1430 517 PANTHER BNAA10G17020D PROTEIN 8 468 - -
Lal23g1430 517 Pfam ATPase family associated with various cellular activities (AAA) 254 387 IPR003959 GO:0005524|GO:0016887
Lal23g1430 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 434 IPR027417 -
Lal23g1430 517 CDD AAA 238 388 - -
Lal23g1430 517 Gene3D - 385 456 - -
Lal23g1430 517 Pfam Domain associated at C-terminal with AAA 37 129 IPR025753 -
Lal23g1430 517 PANTHER BCS1 AAA-TYPE ATPASE 8 468 - -
Lal23g1430 517 SMART AAA_5 249 390 IPR003593 -
Lal23g1430 517 ProSitePatterns AAA-protein family signature. 358 376 IPR003960 GO:0005524|GO:0016887
Lal23g1430 517 MobiDBLite consensus disorder prediction 461 482 - -
Lal23g1430 517 Gene3D - 203 384 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1430 Lal-Chr23 14760358 14763304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1430 242 432 Miscellaneous Gene Families AT3G02450 30.693 1.55e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1430 - - gmx:100789621 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1430 23 14760358 14763304 Lal23g1430 23 14760358 14763304 ECH