Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1399 ATGATATATAGAGTTTCGTATTTGATGGATGAGATCTGGGAGAGGGCTGTTGAAACGGCGCTTGACGGCGAGACGAACCACGCTTCGGTGCGTACACTAACACTTGACGGCGCTGTTAAGTGCGTCCAGGGACGGTTACCTCCACCGAACCTTCTAGAAAGGTTCCAGAACCTTGGACACCTTTCCATCGCAAACATCGGTGTTTCTTCGCTAGAGCAGTTCCCACGGCTCTCGAATCTTCAGAAGCTAATCCTCTCTGACAACAGAATCGCCGGTGGACTTGAATTTCTCGTCCAAGCAGGCCTTGATTCACTTCGGGATCTTGATTTATCGAACAATCGGATTCAGTTTATTGAAGATCTTGTGCCGCTTGCACAGTTGAAGCTTGTTTCGCTGGATCTGTATGAGTGTCCTGTTACGCGTGTTAAGGACTACCGATCTAGGGTTTTTGGGTTGATTAATTCGCTTAAGTATTTGGATAAGATGGATGCGGAGGAGAATGAGAGGCCGGAGAGTGATGATGAAGATGAGGATGATGAAGATGAAGAGGATGATCCTGGTAGTGGAGAGATTGATGGAGAGGATCGTCCGCTTGTGATGAGCAACGGCCATGGGGAGGGGGTGGATGGTGTTGTTGATGTTGATGAGGAAGAAGAGAGTGAGGCTGATGAGGAAGAGGCTGAGACATCGAGGAGGGTTAATGGTTTGAATCGGGAGAATGGGTTTCAGATGGAGATTATGGAATGGGATGAAGAGGATAAGGATGATGAAGAAGAAGAGGATAAGGATGATGAAGAAGAAGAGGAAGACGAGATTGATGAGGAGGAGGGGGATGATGACGAGGATGATGATGATGATGTTGTTGAGGTTCATGAGATTGTTGACAGCGATGACGATGAGGATGGGGTTGAATTTGATGAGGACGATGATGAGGAGGAGGAAGTGGACAATGATGATGTAGAGTTTGTTGGACCGGAGAGTACTGGGTTGTTGACGAGCATTGAAGGGGAGATTGATGGGCATGAGCAGGGGGAGGATGATGAGGATGAATATGACAATGGAGAGACAGGTGAAGATGAGATAGGTGTTGAATATGAAGGAGAGTCTGAAGATGATGATGATGAAGAAGAAGACTATGGTGCTGGATATCTTGTGCAGCCAGTTGGACAGTCTGAAACAGTCAGTGCTGGAGCTGCTTCCATGAATGGTGGAGATGATGATGATGATGATGATGAGGAAGAAGAAGTTGACGATGATGATGCTGAGGTTTTGCCTCCGACTTCTCCAAACCTTAAGAGAAAGCGTGATGATGGTGATGAAGATGATGACAGCGATGAACACTGA 1344 0.4695 MIYRVSYLMDEIWERAVETALDGETNHASVRTLTLDGAVKCVQGRLPPPNLLERFQNLGHLSIANIGVSSLEQFPRLSNLQKLILSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLVPLAQLKLVSLDLYECPVTRVKDYRSRVFGLINSLKYLDKMDAEENERPESDDEDEDDEDEEDDPGSGEIDGEDRPLVMSNGHGEGVDGVVDVDEEEESEADEEEAETSRRVNGLNRENGFQMEIMEWDEEDKDDEEEEDKDDEEEEEDEIDEEEGDDDEDDDDDVVEVHEIVDSDDDEDGVEFDEDDDEEEEVDNDDVEFVGPESTGLLTSIEGEIDGHEQGEDDEDEYDNGETGEDEIGVEYEGESEDDDDEEEDYGAGYLVQPVGQSETVSAGAASMNGGDDDDDDDEEEEVDDDDAEVLPPTSPNLKRKRDDGDEDDDSDEH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1399 447 Coils Coil 255 278 - -
Lal23g1399 447 MobiDBLite consensus disorder prediction 403 422 - -
Lal23g1399 447 MobiDBLite consensus disorder prediction 340 380 - -
Lal23g1399 447 MobiDBLite consensus disorder prediction 167 190 - -
Lal23g1399 447 MobiDBLite consensus disorder prediction 163 447 - -
Lal23g1399 447 SUPERFAMILY L domain-like 48 164 - -
Lal23g1399 447 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Lal23g1399 447 MobiDBLite consensus disorder prediction 211 225 - -
Lal23g1399 447 MobiDBLite consensus disorder prediction 246 321 - -
Lal23g1399 447 Gene3D Ribonuclease Inhibitor 13 178 IPR032675 -
Lal23g1399 447 Pfam Leucine-rich repeat 67 173 - -
Lal23g1399 447 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32-RELATED PROTEIN 2 9 319 - -
Lal23g1399 447 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 9 319 IPR045081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1399 Lal-Chr23 14588638 14592842 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1399 - - qsu:112003480 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1399 23 14588638 14592842 Lal23g1399 23 14588638 14592842 ECH